Poeciliopsis prolifica (blackstripe livebearer): 129362294
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Entry
129362294 CDS
T09758
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129362294 (cpdp)
Enzymes [BR:
pprl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
129362294 (cpdp)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
129362294 (cpdp)
Prokaryotic type
129362294 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
DUF1904
Motif
Other DBs
NCBI-GeneID:
129362294
NCBI-ProteinID:
XP_054889721
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MLLRVWNRSLLPTAPRLARLPGQARGPKPSIMSEKKRKAPTAAAGGKKPSAKQPKLEKAE
KAAGWLQSLVEQQREDKKDVKFNKKRQRFLTDTKTVKQGAEGVLYWMQRDQRVQDNWALI
RAQQLAAKEELALHVCFCLVVPKSELSTLRHYAFLLKGLQQVERDCKRLNVQFHLLHGAP
GEVLPGFVSDRGLGAVVTDFSPLREPQKWLNDVKKKLSKDIPLIQVDAHNIVPCWVASPK
LEYSARTIRGKITNLLPEFLTDFPPVEKHQHTATRTAKPVDWEQTLASLDVDRTVGEPQW
AKPGSEAGMAMLESFIDVRLKLFATQRNDPNMAALSQLSPWIRFGQLSAQRVALQVRRCG
KNASESVAAFIEELVVRRELTDNFCFYNEKYDKVEGAYEWAQKTLKDHAKDKREYIYTRE
QLEKAQTHDKLWNGAQYQMVAEGKMHGFLRMYWAKKILEWTRSPEEALSIALYLNDRYEL
DGQDPNGFVGCMWSICGIHDQGWAERPVFGKIRYMNYKGCLRKFNVAQFERKYCPKKA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccgtgtgtggaacaggtctctgcttcccaccgcaccgaggctcgcgcgactc
cccggtcaggctcgcggaccgaaaccctccatcatgtcggagaagaaacgcaaggcgccg
accgccgccgcgggaggcaagaagcccagcgccaagcagccgaagctggagaaggcggag
aaagccgcgggctggctgcagagtctggtggagcagcagagggaggataagaaggacgtg
aagttcaacaagaagcgccagcggtttctcaccgacacgaagacggtcaagcagggcgcg
gagggggtgctgtactggatgcagagagaccagagggtgcaagataactgggccttgatc
cgtgcgcagcagctggctgcaaaggaagaactcgccctgcacgtgtgtttctgtctggtg
gtcccgaaatcggagctgtccacactgaggcattacgcttttctgctgaaggggctgcaa
caagtcgaaagggactgcaagcggctgaacgtccagttccacctgctgcacggggctccg
ggagaagtgctgcccggcttcgtgtctgatcgcggtttgggcgccgtggtgaccgacttc
tcgcccctccgagagcctcagaagtggctgaacgacgtcaaaaagaagctttccaaggac
atccctctcatacaggttgatgcccataatattgttccctgctgggtagcttcacccaag
ctggagtactctgccagaaccatcagaggaaaaatcaccaaccttctgcctgagttcctc
actgatttccctccggtagagaaacaccaacacactgccacgaggacagccaaacctgta
gactgggagcagaccttggcctccctggatgttgacagaacagtaggggagcctcagtgg
gccaagcccggctcagaagccggcatggccatgctggagtccttcatcgatgtccgcctg
aagctgttcgccacccagcgcaacgaccccaacatggccgctctcagccagctctccccg
tggattcgcttcggccagctttcagcccagcgtgtggcgctgcaggtccggcgctgcggg
aaaaacgccagcgagtctgtggctgccttcatcgaggagctggtggtgcgccgggagctg
accgacaacttctgcttctacaacgagaagtacgacaaagtggaaggtgcttatgagtgg
gcccagaagaccctgaaggaccatgccaaagacaagagggagtacatttacacccgggag
cagctggagaaagcacaaacacacgacaagttatggaacggagctcagtaccagatggta
gctgaggggaagatgcacggcttcttgaggatgtactgggccaagaaaatcctggagtgg
acccgctcgccagaggaggcgctctccatcgctctgtacctgaacgaccgctacgagctg
gacggccaggaccccaacggcttcgtcggctgcatgtggtccatctgcggcatccacgac
cagggctgggcggagaggccggtcttcgggaagatccgctacatgaactacaaaggctgc
ctccggaaattcaacgtagctcagtttgagaggaagtactgtcccaaaaaggcctga
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