Poeciliopsis prolifica (blackstripe livebearer): 129362433
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Entry
129362433 CDS
T09758
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129362433 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129362433 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129362433 (pcdh20)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129362433 (pcdh20)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129362433 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF7330
Motif
Other DBs
NCBI-GeneID:
129362433
NCBI-ProteinID:
XP_054889909
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MGLGTPDNMSWAALLQKLLIMLHTKQIICGSIQFSIKEELEPHTLVGSLSKHFAPPYQLL
TEDYLWLNKSTGNFYIAEKKMDREQLCSEETKDDECIIFQSVIVGPSRELEQFSVIIEDI
NDNVPYFENSKICLDISEDVPEGTSLMLDDLARDRDSGPNGQLKYELKGSGGVFSLKVEE
EGPLIKLIVQKALDRETLNSYQMQLVATDCGEQPLSVSVPIFVTVTDVNDNCPSFSPNSP
LSATVSGDSKKDTVVTQVVAVDPDLGPNAAIVYSLSPKVSERAKKLLILSSHSGHIRLTQ
DLEIDSSEELVLKVLASGLHCPPAETQVTVSLLPKATQGLTIKIGFIAKHHNQTVVIPES
QPPTPLAILELEGDSSFKDSSLAIEGDVPFFLSPQSGKYLLSTSKPLDYEMKSEYHISMV
VQGSSSERSVIAPPQREIRVMVEDVNDNAPHFSQTDYQLEVEENNEPALTLLQVSATDAD
SGLNGRVTYSLDKHTSAIFKVDSVTGQLSALSPLDREQKSVHKLTVFARDSGVPPLESQA
SVIIRVLDQNDNAPVFSTPHFIFFIPENAPPFAQVGVIEVEDPDEGENGKIEWQIVQGNT
SFVVDSIQRTLHTTINLDREMTDCHELYLAVSDNGHPVALTSSARVTIFIEDINDNHPKV
ILPSSNYSCLVISPGTPVGTNVTKVFAIDEDSGVNSEITYSVVAPKSVQQNTPFQVDSKS
GIITLRQELLQEDMGMHNLFIVVRDNGKPTPLYTTVWINLLVNKSTDQCHLDRAPTWTGR
SDWVESASVSPICEVETARSVQAIYFYLVLCMAVAIMVLFFTTVCLYLKQRKYPPKKKMG
PTEENEIPLRIKDKYYSDE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgggccttgggactcctgataacatgagctgggctgcacttctgcagaagttgctgatc
atgcttcataccaagcagatcatttgtggctccatccagttctctatcaaggaagaacta
gagcctcatactctggttggatcactaagtaaacactttgcacctccttaccagctcctg
accgaggactacctgtggctgaacaaaagcactgggaatttctacattgctgagaaaaag
atggatcgtgagcagctctgctctgaggagacaaaagatgatgaatgcataatttttcaa
tccgtaattgttgggccctcgagggaactggagcagttttctgtgatcatagaagacatc
aatgacaatgtgccatattttgaaaatagcaaaatatgcctggatatttctgaggatgta
cctgaagggaccagtctcatgctggatgacctggctcgggacagagatagtggaccaaac
ggacagctgaaatacgaactcaaaggttctggaggagttttttctttaaaggttgaagaa
gaaggaccactaatcaagctgattgtacaaaaggctctggacagagagactctgaactca
tatcaaatgcagctggtggctactgactgtggagaacagcctctgagtgtatcagtacct
atatttgtcacagtgacagatgttaatgacaactgtccaagctttagtcccaacagccca
ctcagtgcaacagtctcaggagactccaagaaggacacagttgttactcaggtagttgcc
gtggacccagatttaggcccaaatgctgccattgtttattccctcagtcctaaggtctct
gaaagggcaaagaaactcttaatcctcagcagtcacagtggtcacatcaggctaacacaa
gaccttgaaatagacagctctgaggagctggtgttaaaagtgttagccagcggccttcac
tgcccaccagcagagactcaggtaacagtatccctcctccccaaggctacccaaggtcta
acaatcaagatcgggttcatagctaagcatcacaaccagactgttgtgataccagagagc
caaccccccactcccttagctattttagagctcgagggtgacagcagctttaaagactca
tctcttgccattgagggtgacgtgcctttctttttgagcccacagagtggcaaatatctg
ctttccacatcaaaacccctagactatgagatgaaaagtgaatatcacatttctatggta
gtgcaagggagttcatctgaaagatctgtgatcgccccacctcagcgagagatcagagtg
atggtggaggatgtcaatgataatgccccacatttctcccagactgactatcagctggaa
gtggaggaaaacaacgagcctgcgttaacactgctgcaggtatcagctactgatgcagac
agtggactcaacggcagggtgacatacagcttagataaacacacatctgccatctttaaa
gttgactcagtgacaggtcaactatctgcattgtctcctctggatagagaacagaaaagt
gtccacaaactcactgtgtttgctcgagatagtggggttcctcccctggagtcccaggcc
tctgtaattattcgtgttctggaccagaatgacaatgcacctgttttctctactcctcac
ttcatctttttcatccctgagaatgcaccaccgtttgctcaggtgggggtgatagaagtg
gaagatccagatgaaggagagaatggaaaaatagaatggcaaattgtacaggggaacaca
tcttttgttgtggacagcatacaaaggacattgcacaccaccatcaacttggaccgggag
atgacagactgtcatgaactttacctggcggtgagcgacaatggccatccagtggcatta
acctccagtgccagggtgactatctttatagaggacattaatgacaaccacccaaaagtg
atccttcccagcagcaattattcatgtttggtcatctctccaggtactccagtgggtaca
aatgtaacaaaggtcttcgccatcgatgaggactctggtgtaaactcggaaatcacatat
tctgttgttgcaccaaagtcagttcagcaaaatacccccttccaggtagattcaaaatca
gggatcatcaccttaagacaggaacttttacaggaagatatgggaatgcataatctgttc
attgtagtaagagacaatgggaaaccaactccactttacactactgtctggattaaccta
ttggttaataagagcacagatcaatgccatctagatagggcaccgacatggactgggaga
tcagattgggttgaaagtgcttctgtgtctccaatctgtgaggtggagactgccagatca
gttcaagcgatatacttttatcttgtgctctgcatggcggttgcaatcatggttttgttt
tttacaacagtttgtttgtatctgaaacaaagaaaatatccaccaaagaaaaagatggga
cctacagaggagaatgagattccactcagaatcaaagacaaatattattctgatgaatag
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