Poeciliopsis prolifica (blackstripe livebearer): 129362525
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Entry
129362525 CDS
T09758
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129362525 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129362525 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129362525 (pcdh11)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129362525 (pcdh11)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129362525 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
DDE_3
DUF6249
Motif
Other DBs
NCBI-GeneID:
129362525
NCBI-ProteinID:
XP_054890048
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MNLASQVHVLVALLTCLVLLCKAQERDYIVKEEQQENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGIFTEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVNEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFRDSELEVSVPENAPMGTSVAQLHATDADLGSNAQVHFSFSNQISSSTKRHF
AINSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPVFPQPEFQLSIPENND
PLMQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSAPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDTDAG
DNAVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTSPGSVVTRVFAIDNDTGMNAELQYSIISNII
ITSRVSPRGLFSIDKTTGNITLQEKIVLADQGLHRLVVKVKDLGQPESLHAIALVHLFVN
DTVSNSTFIQEQLRKSMETPLDRNIGDNEITPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPEDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECGCQGGFKAAGQIATRQNPGQ
TPEKTFNSPPPICPHKSPDLNPVEHLWDVVEQEICIRDVQSRNLPQLCDEACQLGKITSV
NLDSVVRNMRNLSSNLDFSDNYLLQTQRRVTFHLPDGSQESCSDSGLGDAEPSSTASATQ
PLPLSFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLKKALAEASETCTQECLILGHSDS
CWMPPTLAQFQSPGSNSPTSTPTTTTITAALSSFGFQGVKANIGGMGVMDGRHTLGRSVP
KRDELDKGFNRPQFYNTLDRHCSSKKEDPVKVIPLASFSSPGQHTPTGGSSSFLHEHQL
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggcaagtcaggtgcatgttctggtggccttgctcacctgtttggtcttatta
tgcaaggcccaggagagggactatatcgtgaaggaggagcagcaggagaacgttcgcatt
gggaatctgcgcaaggacctcgaccttaacctggaccccaacatcaggctgtcctctccg
ctgcagttcaagcctgtgtataagacgggtgacgtgcctttggtgagggtcgaggccaac
acaggggagattttcaccaccaatcacaggattgaccgggagaagctgtgctcggggatc
ttcacggagaaacgctgctactatgagatcgaggtggcagtgctgcctgatgagatcttt
cgattggttaagatccggttcctgattgaggatgtgaatgacaatgcacccctcttccag
tccactgtaataaacatctccatccctgaaaacacagccatcaacacccgatacccagtg
ccatcagcatttgaccctgatgtggggattaatggaatccaacactatgagctggtcaag
agtgtcaatgagtttggcttagacatcattgagacccctgaaggtgacaagtggccacaa
ctcattgttcagcagaatcttgatcgggagcaaaaggatacctttgtgatgaagatcaag
gtagaagatggtggcaacccccctaaatctagcactgccattctccaggttaccatttct
gatgtcaacgacaatcgtcctatcttcagggacagtgagctggaagtctctgttccagaa
aatgctccaatggggacttctgtggctcagcttcacgccacagatgcagacctgggttcc
aatgcacaggtccatttttcattcagcaaccagatctcctcctcaaccaagcgtcatttt
gccatcaatagctctactggactgattactgtaaagcaacctctagaccgtgaggttact
cctgttcataaactcattgttctcgcaagtgatggcagctcaaccccatcaagagccaca
gtgattgtcaatgtcacagatgttaatgacaatgttccttctatagacactcgctacatt
atcaacctggtaaatgggactgttctactgtctgagaatgctcctctcaacaccaaaata
gcccttattactgttactgacaaggatgccgatctgtatggcaaagtggcttgctacact
gaccatgatgttcctttccggcttaagcctgtctttaatgatcagttcttactggagaca
gctgcccctctagattatgaaaccactcgtgaatatgctattaagatagtggcctcggac
agaggaacgcctcctttgaacacttccgctatggtcttaattaaaatcaaggatgagaat
gacaatgcacccgttttccctcagcctgaatttcagctgtcaataccagagaacaatgac
cccttaatgcagttaataaaaatcagtgccactgatgcagatagcggacacaatgcagag
attatttatactcttggccctgatgcaccggatgggtttaacatagacaggcgatcagga
attctctctgttgggaaacgactggacagagagaagcaagagaggtactcattcactgtc
atagcaagagacaatggctcagcacccttacagagtaatgtcactgttaggctaattgtt
caggacctcaatgacaacagcccagctttcactcaccctgagtacaacttctatgtgcct
gagaacctgccgctttatgggacagtgggcttgatcacagtgacagatacagatgctgga
gataatgctgttatcaccttgtctattttgaacggcaaagacaatttcatcattgaccct
caaactggtgtgatcaaaccaaatatcacctttgacagagagcagcaaagctcatatacc
ttcatggtcaaagcagttgatggaggacagcctccaagttcctcctatgccaaggtcaca
attaatgttgtcgatgtgaatgacaatcgccctgtgtttgttattccttcctccaattat
tcatatgacctggtacgaaccaccacctccccaggttctgtggtgaccagagtgtttgcc
attgacaatgacacaggtatgaacgctgagttgcagtacagtatcatcagcaacatcatc
atcacatctagggtctcccctcgaggtctcttttccatcgacaaaacaacgggtaacata
acactccaagagaaaattgtactagctgatcagggactgcatagactggtggtcaaggtc
aaagatttaggccaacctgagtcattacatgctattgcacttgtacacttgtttgtcaat
gacactgtgtcaaattctacctttatccaagagcagctgcgaaaaagtatggaaacacca
ttggatcgtaatataggggacaatgagataacgcctcaagccaatggatatgtaattgtt
gttatagcgatcatagcaggaaccatgactgttattttggtgatatttgtcactgccttg
gtgcgctgccggcagacacctagacataaagtagtacagaaaggcaagcagagtggggag
tgggtgtcacccaaccaagagaaccgtcaaatcaagaagaagaagaagagaaagaagcga
tctcctaagagtcttctcctaaactttgtgaccatagatgaatccaagcctgaagacccc
acacatgagcatgttaatggcaccctggatcttcctgtagagcttgaggagcagactatg
ggaaagtacaattgggcgaccacacctacaaccttcaaacctgacagcccagacttagcc
aagcactataaatctgcatcccctcagcctacatttcaaatcaaaccagaaactccagtg
gcccctaagaaacatcacgtgatccaggagctccccttggacaatacgtttgtggtgggc
tgcgactcactctccaagtgttcatcgactagctccgacccatacagtgtctcagagtgc
ggctgtcaggggggattcaaggctgcagggcaaatcgccacccggcagaaccccggccag
acaccagagaagacttttaactccccaccacccatttgtcctcataagtcgccagatctc
aatccagtagagcacctctgggatgtggtggaacaggagatttgcatcagggatgtacag
tcaagaaatctgcctcaactgtgtgatgaagcctgtcaacttggcaagataacctccgtg
aatcttgactctgtggtgagaaatatgagaaatctttcttcaaacctggatttctcagac
aactatctactgcagacacaacgtcgtgtgaccttccatcttccggatggttcccaggaa
agttgcagtgacagtgggcttggggacgcagagcccagcagcacagccagtgccacccag
cctctccccctaagcttcccccaagaggagtactatgagcaagcgtcacctaatagtcgc
accgagggagacggaaactcagaccctgaatccaccattgaagtaaatttgaagaaagct
ctggccgaggcatctgagacctgcacccaggagtgtctaatactgggccactctgacagc
tgctggatgcccccaaccctggcccagttccagagccctggcagcaacagccccacctct
acccctaccaccaccaccatcactgctgcgctctcctcctttggcttccagggagtaaaa
gctaacataggtggcatgggggtcatggatggccgccacactctgggtagatctgtgccc
aaaagagatgaattggacaaagggttcaaccgaccacagttctacaacaccctggataga
cactgcagcagtaagaaggaagacccagtgaaggtcattccactggcaagcttctcctcg
cctgggcagcacactcccactggtggcagcagctccttcctacatgagcaccagctgtaa
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integrated database retrieval system
