Poeciliopsis prolifica (blackstripe livebearer): 129362599
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Entry
129362599 CDS
T09758
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04120
Ubiquitin mediated proteolysis
pprl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129362599 (syvn1)
04120 Ubiquitin mediated proteolysis
129362599 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129362599 (syvn1)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129362599 (syvn1)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129362599 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
129362599
NCBI-ProteinID:
XP_054890186
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MVRAVLVTATSMALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHLRVLSLLGLLAIMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQAQTPPPAPAPAPAAPANAP
AAPAPNVAPGMLPGFPPGVFPFWGPFPAVPPPAAAAPPAAPAAADAPPGSTDTTQAAGTS
QPTSAAADAATSSAAAAAAPGSAIPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPS
LSRLTEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRPEGGA
TDAGGANQEAASAGAESPTAERDSSTSDPVGGATVSSQPADSTSSASDAERKENWDEGAA
DDENGEPSAAELRRRRLRKLETSPTSPSPPPEN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagtcctggtgaccgccaccagcatggcgctgaccggcgctgtggtggcc
cacgcctacctgctcaaacatcagttttacccgaccgtcgtgtacctcaccaaaagcagc
cccagcatggcggttttgtacattcaggcgtttgtgctggtgttcctgctggggaaggtc
atgagaaaggtgttctttggccagctgagggctgctgaaatggagcacctcatcgagcgc
tcctggtacgcggtgacggagacctgcctggcattcaccgtgttcagggacgatttctcc
cctcgcttcgtcgccctcttcaccctcctgctcttcctcaagtgtttccactggctggcc
gaggaccgggtggactttatggagaggagtccgaacatatcctggctttttcacttgaga
gttttatctcttctaggacttctggctatcatggacttcctgtttgttaaccatgcctgc
cacagcatcatcaccagaggagcttcggtccagctcgtttttggctttgagtacgccatc
ttgttgaccatggtcctgacgacattcatcaaatacatcctgcacaccgtcgaccttcag
agtgagaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaggttctcctctacatcgccttcatgaccattatgataaaggtccacaccttc
cccctgttcgccatccggcccatgtacctggccatgaggcagtttaaaaaagccgtaaca
gatgcgatcatgtcaaggagagcaatccgcaacatgaacactctatatcctgacgcgact
ccggaggatctgcaggcctcggacaacgtctgcatcatctgtagagaggaaatggtcacc
ggagccaagaagctaccctgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgccctacctgccgcatggacgtcctcagggcatccaacaacaac
caggcccagaccccacccccggctccggccccggccccggcggcgcccgccaacgccccg
gctgccccggccccaaatgtcgctcccggcatgctgccaggcttccctccaggagttttc
cctttctggggtcctttccctgcagttcctccacctgctgctgctgctccacctgcagct
cctgctgcagctgatgctccaccaggcagcacggacacgacgcaggccgctggcaccagc
cagcccacttctgctgctgcagacgctgctacatcatcagctgctgccgccgccgctcca
ggatcagcaatcccaggattccctttctccttcccgcctcctcctttccctgccgcgcca
tggctgccaatgcctccgcctcctcccttcgtgtcgtccatgcctcctccgcctccatcg
ctctctcgcctgacggaggaggaactgagggagctggaggccgaagggaggaggggcctg
gaggccaggctgcagtgtctccagaacatccacaccctgctggacgccgccatgctcaac
atccaccactacctcagcaccgtcgccacgctcgcacctcctcggcctgagggtggcgcc
acagacgccggcggagccaatcaggaggcggcgtccgctggcgcagagagtcccaccgcg
gagagggactcgtccacctccgacccagtaggtggagccacagtctcctctcagcccgct
gactccacctcctctgcctcagacgcagagaggaaggagaactgggacgaaggagcggcc
gacgacgagaacggagagcccagcgcggccgagctgaggcgtcgccgtctccgtaagcta
gagacgtcgccgacgtcgccgtcgccacctcccgagaactga
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