Poeciliopsis prolifica (blackstripe livebearer): 129362637
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Entry
129362637 CDS
T09758
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129362637 (rlim)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129362637 (rlim)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129362637 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129362637
NCBI-ProteinID:
XP_054890268
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MEGSDGIEQGGGDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQPQNNNPSTENTEDPVETPENSEDSQGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQGPSEQPPAGQEEE
EVADPEPQVPMEAEVVEEPVVEELAVIVEPEPEETPEEEVASQEAVEEPPSPPPAPPPPP
APVVAEASPEQPLPCSSPRRGQRRPRSRSPEPRRTRARLARSRSPLRLDQLDGLPSPRHT
YSSQNPSSSTDTPPAPQVEGSSRTRQHILSRQSPADDNVHPPSVEAESVPEAQNVRPQEG
EPNGNEGGLAERRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGG
FRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDS
DSDSSDSNRGTGTPADTESITNPDASNADGSAADEQPSVAAAAGARERTVETEVDEGLTT
GPQASGGRARPRPPINLEEPSSLPFLRLAHFFLLNDDDDDQPQGLTKEQIDNLSMRNFGE
SDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESV
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacggcatagagcaaggtggcggtgaccagccagagtcgcagcgccga
aggcagttggatcgtctagaccgggaagaagccttttatcaatttgtcaacaatctcagt
gatgaggactatcgtcttatgagagacaacaacctcttgggcaatccaggggaggtaact
gaggatgagctgttcaatagacttcaacaaatcaaagatggtccagagcagccgcagaat
aacaacccaagcacagaaaatacagaggatcccgttgaaactccagagaactctgaagat
tcccaaggtggggatagcttgctagactggctcaacacagtgagacgaactggcaacaca
actagaactggacaccgtggaaaccagtcgtggcgagctgtgagccagaccaatccaaac
agtggtgactttcgctttagcttggagatcagtgtgaaccgcaatctggccgaacagcaa
gccgctgctgagggagaacaggggccttcagagcagcccccagcaggccaagaggaagaa
gaggttgcagatcctgaaccacaggttcctatggaagcagaggttgtggaagaaccagtt
gttgaagagttagctgtcattgttgagccagaacctgaagaaacacctgaagaagaggtt
gcctcacaagaagctgttgaggaacctcccagtccacccccagctccacctccacctcca
gctccagttgtagcagaagcttcaccggagcaacccttaccttgttcttctccacgaagg
ggacaaagaagacctcgcagccgtagcccagaaccacgcaggaccagagcccgcttagcc
agaagccgctcacctctccgtttggatcagctagatggcctacccagtccacgacacacc
tacagctctcagaaccccagttcttccaccgacacacctccagcgcctcaagtggagggc
agttctcggactcgacaacatatactctccaggcaaagcccagcagacgacaatgttcat
ccacccagtgtcgaagcagaatcagtcccagaggcccagaatgtcagacctcaggaagga
gaacccaacgggaatgaaggaggcttggcggagcgccgtcccccaactataatgctcgac
cttcaggtgcgtcgtgtgcgtccaggtgaatatcggcaaagagacagcatcgccagccgt
acccggtcacgctcgcagaactccaacaacacttttctctatgagagtgagcgagggggt
tttcgcaggaccttctcgcgctccgagcgtgccggagtgaggacctacgtcagcaccatt
cggatccccattcgcaggatctccgacgcagggttaggagaagcgacgtcgatggcactc
caatctatgataaggcagattatgacaggcttcggcgagctaggctacctcatggactct
gactcagattcttcagattcaaaccgcggtaccgggacacccgcagatacggaatccatc
accaatccagatgctagtaacgctgacggatctgctgctgatgagcaaccatcggttgct
gctgctgctggagccagagagaggacagttgagacagaagtggatgagggtcttactact
ggcccacaggcttctggtggaagggctcgacctcgaccccccattaacctggaggaaccc
agctcgctgcccttcctgcgacttgctcacttcttcctcctgaatgacgatgacgatgac
cagcctcaggggctgaccaaagaacagattgataacctttccatgcgcaactttggtgag
agcgacgccttgaaaacctgtagcgtctgtataacggagtacgctgaggggaacaagtta
cgcaagcttccctgctctcatgagtaccacgtgcactgcatagaccgctggctctctgag
aactccacctgccccatctgtcgcagggctgtcctggtttcagccaaccgagagagcgtg
atctaa
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integrated database retrieval system
