Poeciliopsis prolifica (blackstripe livebearer): 129362643
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Entry
129362643 CDS
T09758
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129362643 (si:ch211-114c17.1)
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129362643 (si:ch211-114c17.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
HrpB1_HrpK
UTP6_C
TPR_12
TPR_16
TPR_11
HAT
NUP160_helical
TPR_21
Motif
Other DBs
NCBI-GeneID:
129362643
NCBI-ProteinID:
XP_054890283
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAAESCEEMSGNGVPEESPAMDVTEAAPPPPEALEENGGAASTPEGPTEPDDYSTGLEAA
SEQGDLPADFERLWKAAHDNPQDFPNWTDLLQYCEHEGHTAAYRRALEAFLARYPLCYGY
WKKFVDLERRDGDNDKAEEVCIRGLQAIPLSVDLWIHYINLLLGTLDMNLPDSAVRIRSV
FENGVASCGLDFHSDRLWDLYVEWEKEHGNVKNAAAVLDRALRVPTQLYSTHYDKFKAHL
NNNPPKDVLPSEEYEELRATCRQSQKAKRAEQAQEADEERPPGEEEPATPEGTDSEELMQ
KIRDQVLLRRDKVYQDNEGEVRKRWNYEDAIKRPYFHVRPLDRLQLRAWHSYLDWEIAEL
NKDTRESSQDPNQESTEESEITTQRQDSPAVQGDHRVRILFERCLIACALYEEFWTRYIQ
YLEPQSVQETRAVYRRACQVHLPNKPNIHMQWATFEERHGDLNEARRVLEALEKARPGLA
VVRIRRAALERRAGRLDQSEALLREAVAESKERPTLHAFYSIKLARLLLKVARNPDGART
VLQEALEISPDNDKLHLNLLDLESSAEPGASPEAVQECVTRALAAPLTPQTKLLLSQRGL
QFTEEYSNSIKSVLSVYEAHQKLLDELGGTKREAENGDEDPEKTSKTDDSSSAAAAAAAA
APASSASHVPITTPPPPVMATDPSAQAGYGAYSSWYQQPQYGGYGGYGYQNAWNYNQSYY
PPS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagagctgtgaagagatgagcggtaacggggtgcctgaagagtctccagcc
atggatgtcaccgaagcagcgcctcctcctcctgaagcattggaagaaaatggaggtgcc
gcttcgacccctgagggtcctacagaaccagatgactactccacaggcctggaagcagcg
agcgaacagggggatctacctgcagactttgagcgtctatggaaagccgcacatgacaat
cctcaggacttccccaactggactgatctgctccagtactgtgagcatgagggtcacact
gctgcgtaccgcagagcgctggaagcctttctggctcggtatcctctctgctacggctac
tggaaaaaatttgtcgacctggaacgtcgagacggcgacaatgataaagcagaggaggtg
tgtattcgtggtcttcaagcaattcctctgagcgtagatctttggatccactacatcaat
ctgctgctgggaacgctggacatgaacctgcccgattcagctgttcggattcgcagtgtt
tttgagaatggcgttgcgtcgtgcggtttggatttccactcggaccgcctctgggatctc
tacgtggagtgggagaaggagcacggaaacgtgaagaacgcagcggccgtcctggaccgg
gcgctcagagttcccactcagctctatagcacccactacgacaagttcaaagcgcatctt
aacaacaacccgcctaaagacgtgctcccctcagaggagtacgaggagctgagggcgacg
tgccggcagagccagaaggcaaagcgggccgaacaggcccaggaggcggacgaggagaga
ccaccaggagaggaggagcccgctacacccgagggtaccgactctgaggagctgatgcag
aagataagagaccaggttcttcttcgtagagacaaagtttaccaggacaacgagggagaa
gtcaggaagagatggaactatgaagatgctatcaagcgtccatacttccacgtccggccg
ctggaccgcctccagctccgagcctggcactcctacctggactgggagatcgctgagctg
aacaaagacaccagagagtcctcacaagatccaaaccaggaatcgacggaggaatctgag
atcacaacgcagcgccaggattctcccgccgtccagggcgaccacagggttcgcatcctg
tttgagcgctgcctgatcgcctgcgctctgtacgaagagttctggaccaggtacattcag
tacctggagccgcagagtgtgcaggagacccgggccgtctacaggcgagcctgccaggtc
cacctccccaacaagcccaacatccacatgcagtgggccacgtttgaggagagacacggt
gacctcaacgaggcccggcgggttctggaggccctggagaaagcccggcctggtctggct
gtggttcgcattcgcagggcggccttggagcgccgagcgggccggctggaccagtcggag
gctctgctgcgagaggcggtggctgaatccaaagagaggccgacgctgcacgccttctac
tccatcaaactggcccgtctgctgctcaaagtggccagaaacccagatggcgctcgcaca
gttttacaggaagcgctggagattagtccggataacgacaagctgcacttgaacctgttg
gacctggagtcgtctgcggagccgggcgcttcacccgaggcggtgcaggagtgtgtgacc
cgggccctggcggctccgctcaccccacaaaccaagttacttctgtcacagagaggcctc
cagttcacagaggagtacagcaactccattaagagcgtgctgtccgtctacgaggcgcat
cagaagctgctggacgagctgggaggcacaaagagagaagcagagaatggggacgaggat
ccagagaaaactagcaaaacagacgacagctcttctgcagctgcagcagctgctgcagct
gcaccagcatccagcgcgtcacacgttcccatcaccacgccgccgcctccggtgatggcc
accgacccgagcgcccaggccggatacggagcgtacagcagctggtaccagcaaccgcag
tacggcggctacggcggctacggctaccagaacgcctggaactacaaccagtcctactat
ccacccagttaa
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