Poeciliopsis prolifica (blackstripe livebearer): 129362790
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Entry
129362790 CDS
T09758
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129362790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129362790
03012 Translation factors [BR:
pprl03012
]
129362790
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129362790
Translation factors [BR:
pprl03012
]
Eukaryotic type
Release factors
129362790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
129362790
NCBI-ProteinID:
XP_054890497
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRVHGAESNGAENDEKILYLTPEQEKDK
SHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcggcggacagaaacgtggagatatggaaaatcaagaagctg
atcaaaagtttggaagctgcccgcggcaatggcaccagcatgatctcactgatcattccc
ccaaaggaccagatttccagagtagccaagatgttggcggatgagtttggcactgcttcc
aacatcaagagtcgagttaacagactctccgtactcggggccatcacctctgtacagcaa
agactaaaactctacaacaaggtgccaccaaatgggttagttgtgtattgtggcacaatt
gtgacagaggaaggcaaggagaagaaagtcaatatcgactttgagccttttaaaccaatc
aacacctctttgtacctctgtgataacaaattccacaccgaggcattgacagccctgctc
tccgatgatagcaaatttggctttattgtgatcgacggtagcggggcactatttggcacg
ctgcagggcaacacccgggaggtgttgcacaagttcactgtggacctacccaagaaacac
ggtagaggaggccagtctgctctgcgttttgctcgtctaagaatggaaaagagacataac
tacgtgaggaaagttgctgagactgctgtccagctctttgtctccaacgacaaagttaat
gtggcaggaatggtcttggctggctctgcagattttaagactgaactaagccagtctgat
atgtttgaccctaggttacaggctaaggttttgaagctggttgacatctcatatggagga
gaaaacggtttcaaccaagctatcgagctgtcggcagaagtcctgtcgaatgttaagttc
atccaggagaagaaactcatagggcggtactttgatgagatcagtcaggatacggggaag
tactgctttggagtggaggacacgctgaaagccctggaaatgggagcggtggagatcctt
atagtgtatgagaacttggacacaatgcgttatgttctacgtgtgcatggggcagagagc
aacggggcagagaatgatgagaagattttatacttgacgcctgagcaagagaaagacaag
tcacactttacagacaaggagacggggcaggagcacgagctgattgagagtatgccactg
ctggagtggttcgcaaacaactacaagaagtttggagcaacgctggaaattgtaacagac
aaaagtcaggaagggtcccaatttgtcaagggctttggaggcattgggggtatcttgcgg
tacagggtggatttccagggcatggagtaccaaggagaggacgacgagttctttgatttg
gatgactactag
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