Poeciliopsis prolifica (blackstripe livebearer): 129362800
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Entry
129362800 CDS
T09758
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
pprl04082
Neuroactive ligand signaling
pprl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129362800 (gabra4)
04082 Neuroactive ligand signaling
129362800 (gabra4)
04519 Cadherin signaling
129362800 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129362800 (gabra4)
Ion channels [BR:
pprl04040
]
Ligand-gated channels
GABA-A
129362800 (gabra4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
129362800
NCBI-ProteinID:
XP_054890516
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MLFAKKKEMVTATRRAFIRTLVYLFCLTTCAKTTSGQTRKDEKIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPVEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKKKPGKCP
PVPQSTPVKVKDAEEVQQQVPDTNGSLRKRMNYVSHQDPAGQPRAQSTTNISGLGRGRQL
RALAGGANGSSSTLSRSSPKSESLLSVASSSAQLVKGTPQPAASTPDVMAGTPGRCPAGP
ASLQHLLGPKLERIQMMGNKPEQKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTVVAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgcaaagaagaaggagatggtgacggcgacgcgacgcgcgttcattcggacc
ctggtctacttgttctgtttgacgacttgtgcgaaaacaacctccggacaaaccaggaag
gatgagaagatttacccggagaatttcactcggattctggaccgacttctggacggctac
gacaacaggctgcgacccggattcggaggtcctgtgacagaggtgaagaccgacatttat
gtgacgagttttgggccagtctcagacgttgaaatggaatacactatggatgtattcttc
cggcagacctgggtcgatcggagattgatgtacgagggtccagtggagatactgagactt
aacaacctgatggtgaccaaggtctggacaccggacactttcttcaggaacggcaagcgg
tcagttgcccacaacatgaccgcgcccaacaagctcttccgcatcatgaagaacggcacc
atcctttacaccatgaggttgaccattagcgccgagtgtcccatgaagctggtggatttc
cccatggacggacatgcctgccccctcaagtttggaagctacgcctaccccaaaacggag
atgatctacacttggaccaaagggccccagcattcggtggaggtccctcccgagtcctcc
agcctcgtccagtatgatctcatcggccagacggtttccagcgagaccattaaatcaatc
acaggtgaatatgtggtgatgacggtctacttccacctgaagcggaagatgggctacttc
atgattcagacgtacatcccctgcataatgacagtgatcctctctcaagtgtccttctgg
ataaacaaggagtcggtcccggcacgtaccgtttttggaatcaccaccgtcctgaccatg
acaacactcagcatcagcgcccgccactctctccccaaggtctcgtacgcaaccgccatg
gactggttcatcgccgtctgcttcgccttcgtcttctctgccctcatcgagttcgctgcc
gtcaactatttcaccaacgcacagattgagagggccaagaagaagccgggcaagtgtccc
cccgtgccccaaagcacgcctgtcaaggtgaaggacgcagaggaagtgcagcagcaagtt
cctgacaccaacggctccctgaggaagcgcatgaattatgtctcacaccaagacccagcg
ggccagccgagagcccagtccaccaccaacatctcaggactgggaagaggaaggcagctg
agagcgctggctggcggcgccaacggcagctcctcgaccctctcccgctccagccccaag
tccgagagcctgctgagcgtggcctcgtcctcagcacagctggtgaagggcacgcctcag
cccgcggcgtccaccccagacgtgatggcggggacgccgggccggtgtcccgccggcccg
gcgtctctgcagcacctgctcgggcccaagctggagcgcatccagatgatgggcaacaag
ccggagcagaagcagacgccgtgctcccagccgaccaccgccggcatgggcggaaccagc
aaaattgacaaatacgcccggatcctgttcccggtgtcctttggggcgttcaacatggtc
tactgggtggtctacctgtcgaaagacacagtggtggccaaagggggataa
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