Poeciliopsis prolifica (blackstripe livebearer): 129362801
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Entry
129362801 CDS
T09758
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
pprl04082
Neuroactive ligand signaling
pprl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129362801
04082 Neuroactive ligand signaling
129362801
04519 Cadherin signaling
129362801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129362801
Ion channels [BR:
pprl04040
]
Ligand-gated channels
GABA-A
129362801
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
129362801
NCBI-ProteinID:
XP_054890517
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MWSKEGRSSLVSCLVVLAALWEIRSVNAVSENITQFTLILDRLLDGYDNRLRPGLGDRVT
EVKTNIFVTSFGPVSDTDMEYTIDVFFRQSWRDERLTFHGPMNILPLNNLMASKIWTPDT
FFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKFGS
YAYTTSEVTYAWTRNASDSVVVEEESSRLNQYDLLGQTVGQERIKSSTGEYTVMTAHFHL
KRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPK
VAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVSEKQKKEKASVMKRNN
AYAVAVANYAPNVGKDSSTLPTIAKGGAVDPGKAKTDGKAPDAKKTFNSVSRIDRLSRIM
FPVLFGSFNLVYWATYLNREPVIKDMVPSN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcaaggagggaaggtcttcactggtctcctgcctggtggtgctcgcggctctc
tgggaaatcagatcggtgaacgccgtgtcggagaacatcacccagttcacgctcatcctg
gacagactgctggatggatacgacaaccgtctccggccgggtctgggagacagggtaacc
gaggtgaagaccaacatcttcgtcaccagctttgggccggtctcagacaccgacatggag
tacactatagacgttttcttccggcaaagctggagggacgagaggttgacgtttcacggg
ccgatgaatattttgcccttgaacaacctgatggcgagtaagatctggactcctgatacc
ttctttcacaacggaaaaaagtctgtggcacacaacatgaccatgcccaataaactgtta
cggatcaaagacgacgggactctgctctacaccatgaggttaacagtgcatgccgagtgc
ccaatgcatctggaggatttccccatggactttcactcctgtcctctaaaatttggcagc
tatgcctacacaacctcagaggtgacttacgcttggacccgaaacgcttccgactcggtg
gtggtggaggaggagagctcccgcctgaaccagtacgacctgcttggtcaaactgttgga
caggaacgcatcaaatcgagcacaggtgaatacacagtgatgacggctcatttccaccta
aagaggaagatcggctactttgtcattcaaacgtacctcccgtgcatcatgacagtcatc
ctttcccaggtgtcattctggctaaacagagaatcggtccctgccaggactgtgtttggc
gtgaccacggtcctcaccatgaccactctgagcatcagcgccaggaactccctgcccaag
gtcgcctacgccaccgccatggactggttcatcgccgtctgctacgccttcgtcttctcc
gctctgatcgagttcgccactgtcaattacttcacaaagcgcggctgggcctgggatggg
aagagtgttgtgagtgagaagcagaagaaagagaaggcttctgtgatgaagaggaacaac
gcctacgccgtagcggtggcaaactacgcgccgaacgtgggcaaggactccagcacgctc
ccgaccatcgccaaaggtggcgctgtggatcccggcaaggccaaaacggacggcaaggcc
ccggatgccaagaagacgttcaacagcgtcagcaggattgacaggctgtcgcggattatg
ttcccggttctcttcggcagcttcaacctcgtctactgggccacctacctaaacagagaa
ccggttataaaggatatggtcccgtccaactag
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