Poeciliopsis prolifica (blackstripe livebearer): 129362810
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Entry
129362810 CDS
T09758
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129362810 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129362810 (si:ch73-233f7.1)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
129362810
NCBI-ProteinID:
XP_054890530
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MEHKLCRGCWVPVTGLVICLLLCACVVDLVLAQIRYSIPEELDHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPNCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWTEFNLDITESAAPGSRFPLESAQDQDVGTNSLRSYQLSANQH
FVLNIQTRNDGSKFAELVLDTPLDREQQKRHEMVLTAFDGGSPERSGTALITITVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YMGEIRVKGVVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDASPGTVIAVISVMDRDSGENGNVDCQIPNNVPFQLHSSFKNYYTLVTSEPLDRET
VSEFNITLTARDLGSPSLSTRRTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
SAFDPDSNQNSYLSYSILEGQIQGMSVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNVTVNVFVLDQNDNAPVIVSPLPKNGSVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVIQATDPGLFSVALYTGEIRTIRRLVEKDATRQRLVILIKDNGQPPLS
ATASIVLTVVDSVPESLSDFGDLTLSPKPPSNLALYLIVSLSTISLIFLVAIIVLAVVKC
YKDRETHSGYNLPPLACCCCGGFQPEPPPEVFKKSNLNLQISSASKVPTNCMEVNGNSSF
SQSYCYKACLTPESAKSDFMFLKPCSPSSTPRNNEAKNADNSWNAHSRSVSVNNGATTPN
ELKQPNTDWTLTKTQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTQMK
GVKDYKMSPSPSGIPSRPWTPRCTPPPQQQQPPIPSHPHPHPHPHPPPDYHHNVYIPGTP
SGFCTLRPTVQRSELDVHNSFSTFGKKRRLQMSPQGEAAVINNDLYND
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaacataaactctgcagaggctgctgggttccggtgactggtctggtcatatgtcta
ctgctgtgtgcgtgtgtggtggacctggtacttgcgcagatccggtactccattcccgag
gagctggatcacggagcatttgtgggcaacatcgcagaagatctgggtctagatgtggcc
aagctctcagcgcgaaggtttcgcatcgtctccggcgcaaagaaacagtatttagaagtg
aacttggagaacggaatcctctttgttaacgaaaagatagacagagaggagctgtgcgaa
agaagcccaaactgttttctacacctgcaagttgtcattgaaaacccgttagaactgtac
agagtggaagtggagattttagatgtcaacgacaactcccccagcttcccgtggactgag
ttcaatctcgacatcacagagtctgctgcgcccggctctcgcttccctttagagagcgca
caggaccaggacgtgggcaccaactctctgcgctcctaccagctgagcgcaaaccagcac
tttgtgctcaacatccagacgcgcaatgatggcagcaagtttgctgagctggtgctggat
acgccgcttgacagggagcagcaaaaaagacacgaaatggttcttactgcttttgatgga
ggctcaccggaacgctctgggacagcgctaataactatcactgtgttagatgccaacgac
aacgtgcctgtctttgaccgctcggtttatagggcgagcttggtggaaaacgcacccagg
ggaacgctggtgctgaagttaaacgccacagacttggacgaaggctcaaatggggaagtt
acatacgcgtttagtgggcacgcgcctcttaaggtgcgtgaattgttcagcgtggatccc
tatatgggggagatacgtgtgaagggcgttgtggactacgagaaagccagtgtctatgaa
ctgtacgttcaggcaaaagacagaggaccgtcagctgtggcagtacacagtaaggtactg
gtggacatcctggatgtgaatgacaacgcccccgaagttatcctcacatccgtgtccaca
cctgtccaggaggacgcgtcgcctggcacagtaatagctgtgatcagcgtcatggaccga
gattcgggagagaacgggaacgtggactgtcagattcctaataatgtcccctttcagctc
cattcatcttttaaaaactattacacgctggtgacaagcgagccgctggacagagagact
gtgtctgagttcaacatcacacttacagccagagacttgggctccccctcactctctacc
cggagaacaattctggttcaagtgtctgacataaacgacaaccccccgcggttctctcaa
ccttcatacacagtttatgtgaccgagaataacgccccgggcgcttccatttgctctgtc
tctgcattcgacccagattctaaccagaactcatatctgtcttattctattctggagggt
caaattcagggcatgtccgtgtccacttatgtctccatcaactccgacaacggcaacata
tacgcactgcgctctttcgattatgagcaacttcggaactttcagattctggtacaggca
caggacgctggtttcccccctctcgccagcaatgtcacggtcaacgtgtttgttctggac
cagaacgacaacgcgcccgtcattgtgtccccgctgcccaagaacggctctgttgccacg
gaggtggttccgcgctctgtggacgcggggtatttggtcaccaaaatcacagcgcttgac
gcagacgcagggcaaaactcccggctatcttaccaggttattcaggcgactgacccgggc
ttgttcagcgtggctctgtatacaggcgaaatcaggaccattcgccgattagtggagaaa
gacgcaacaagacaacgattagtaatattaatcaaggacaacggacagcctccgctctct
gccactgcctctattgtcctcacagttgtagacagcgtgcctgagtcgctgtcagatttc
ggagatctaacactcagcccgaaacccccctcaaacctcgccttgtatctcatcgtgtca
ctcagcacaatatctttaatattcctggtggccatcatagtgctggctgttgttaaatgc
tacaaggatcgggagacccacagcggctacaacctgccccccttagcctgctgctgctgc
ggggggtttcagccagagccgcccccggaggtgttcaaaaaatccaacctcaatttacag
atttcatccgcgtccaaagtacccacgaactgcatggaggtgaatggaaatagcagtttt
tctcagtcatattgttataaagcctgtctgacccccgaatcagccaaaagtgactttatg
tttctgaagccgtgcagcccgagcagcacgccgaggaacaacgaggcgaagaacgcggac
aactcgtggaacgcgcacagccggagcgtatctgtgaacaacggagcgacaactccgaac
gagctcaagcaaccaaacacagactggactctcacaaagacccagaactcttccatcaaa
agttacaactccatcaatatggatggcacgcttatgcgtaaggcaatgcatgcagaccca
gagaactacgtcacttcaatggcacctggacaatactggacatggggaactcaaatgaag
ggtgtgaaagactacaaaatgtctccatcacccagtgggattccttctcggccctggact
cctcgatgcacgcctcctccacagcagcagcagccaccgattccctcacatccgcaccca
catccacatccacacccaccacctgactatcaccacaatgtgtacattcctggaactcca
tcaggcttctgcacgctgcggccaacagtgcagcgaagtgaactggacgtccacaattct
ttctccacgtttggcaaaaaacggcgtcttcagatgtctccgcaaggcgaagctgcagtg
ataaataatgacctgtacaacgactga
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