Poeciliopsis prolifica (blackstripe livebearer): 129362893
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Entry
129362893 CDS
T09758
Symbol
pcdh12
Name
(RefSeq) protocadherin-12 isoform X1
KO
K16499
protocadherin delta 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129362893 (pcdh12)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129362893 (pcdh12)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
129362893
NCBI-ProteinID:
XP_054890672
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MLLCVTMLLALLLVLSLSSGTLCSESSSIIIHYRVWEEQPSGTRVGRLLDDLRQRDEVGP
LEDFQVVEQVKALPFSVMPRDGVISTQGRLDREALCRGSDLCEVAFSVLYRKSGSVNCLR
IRVEVMDLNDHSPSFPNTTQEVEISETAPLRMRIPLDRAVDLDAGPNGLQTYSLSVNQHF
ALDVTDGSGGSKQAELVVIKELDREVQDSFDLILVAYDKGNPPKSGSMSVHVVIQDSNDN
SPAFENSSPTVTLSENTPIGTTIFKLTATDPDLGANGEVKYWFSKHTPAEFQKLFHVDSQ
TGEVIVKAPLDYEREPYFVLNIQAIDHGPNSMPTHCKLHIKLVDVNDHAPRISTKWLSPT
SAVPTVREGAPIDTFLALVTVYDADSGKNGEVSLTIQAGSGPFHLKSTDHFNYLIVTKES
LDREKVNNYTIKLIAQDHGNPSLVTIENLPVSVLDENDNAPVFLKSIYKTSVTENNFEED
AVLEVKASDDDQGLNGKVSYKIKKLPDQKSFSIHPTTGVIRVLRSLDHEESQSYSFIVEA
VDYGHPPLTGSTTVHIDVEDLNDNNPVIKEPKPRNGVVSVSIPVNAQKGEIVTELGNDTE
KKPTSPPISHSVLDGFNGFPASTIKAEDPDSGLNGQLKYMISNGNTNGLFWMDEDTGQLF
VNATNATELIGRTFEMELSVADMGTPSCKIEATLEVTFINLQDHLKNSSPGNRGQLSFTM
MMAICLSATCLLLLLAIALLTTFCRPEKRDNRAYNCRQAESSYTRHPRRPQKNIRKSDIQ
LIPVIRGRKEEPSEEDSEVQPLTSAPLPEDQQIEKEYNFISSVMNTSFHSQSYSEVDSTQ
HVGHHCKTLRKPGNIEIDGTLTLTPATSYQTLCKTRNPSSSSSSLSHFSTLKRNKLHPES
EESRPQRSTSQATLRRPKMSDGQQDAEHQQMLRNLVRLSMAAFGDTIELSSASPEVQQIS
QLLSLLRQGQLQPRTNFRGNKYSHRNGRYGGHDCSDWQSTKDSGHGESEAGDVDWEAGRD
SPIDPQLEEGLNNLLNSPDDVFSEISDPAWMARLSLPLTADYHDNVFVPNGPPSPESEIL
PRDGLNSTSSFSTFGKTPEKDGQLGGALLSEVSTLFEMLMTQKADAHPGPRPDILYRLSA
AYQRSLGLDATTAGGSAPKNCSEKRPAVAGASKHQYQ
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgttactctgtgtcactatgctgctggctctgcttctggttctgagcctttcctctggg
actctctgctctgagtcatcttcaataattatccattaccgggtttgggaggagcagccg
tcgggaactcgggtcggccgtctgttggacgacctccgtcagagggatgaagtcggccct
ctggaggatttccaggtggtggagcaggtaaaggcccttcctttctctgtgatgcctcga
gatggggtcatctccacccaaggtcgactggacagggaggcgctgtgccggggatcggac
ctttgtgaggtggccttcagtgtcctctacagaaaaagcggctctgtgaactgcctcagg
atccgtgttgaagtgatggacctaaacgaccatagtcccagcttccccaacaccacacag
gaggtggagatctcagagactgccccccttcgtatgcgaatccctttagatcgagctgtt
gatctcgatgcagggcccaacggcctccagacctattccctgtcagtcaatcaacacttt
gctttggatgtgacagatggttcaggtgggtcaaaacaagcagagctggtggttatcaaa
gaattagacagggaggttcaggactcttttgacctgatcctggtagcatacgataaaggg
aacccaccaaagtccgggagcatgtctgttcatgttgtgattcaggactcaaatgataac
agcccagcttttgagaacagcagtccaactgtgactctaagtgagaatacacccattggg
acaaccatcttcaagcttacagcaactgacccagacctaggtgctaatggtgaggtgaaa
tactggttcagtaaacacacaccagcagagtttcaaaaacttttccatgtggattcacag
actggagaggtgattgtaaaggctcctctggactatgagagggagccatactttgtgctc
aacatacaggccattgatcatggtcccaatagcatgccaactcactgcaagctacatatc
aagcttgtagatgtaaatgatcacgcaccaaggattagcacaaaatggctttcacccacc
tcagctgtccccactgttagggaaggagctccgattgatacgtttctcgcactggtgaca
gtttatgatgcagattcaggaaaaaatggagaagtaagcctgactattcaagcaggatca
gggcctttccatcttaaatccactgatcattttaattacttgattgtaacaaaagaatcc
ttggatcgagagaaggttaataattacaccatcaaactcattgctcaggaccatggaaat
ccatctttagttactattgaaaacttgccagtttctgttctagatgagaatgacaatgca
ccagtatttctcaaatctatttataagacttcagttacggagaacaattttgaagaggat
gcagttcttgaagtcaaagccagtgatgatgaccaaggactcaatggaaaagtttcttac
aaaataaagaaacttcctgaccagaaaagtttctccatacatccaacaactggagtcata
agggtactccgaagcttagaccacgaggaatctcagagttactcttttatagttgaagct
gtggactatgggcacccaccactaactggttcgaccacagtccatattgatgttgaggat
ttaaatgacaacaatccagtcatcaaggaaccaaaaccaagaaacggggtggtttctgtg
agcatccctgtgaatgcacaaaaaggggagattgtgaccgagcttggaaatgacacagaa
aaaaaacccacttctccgccaatcagtcactcagttttggatggattcaatggctttcct
gcatcaacaataaaagccgaagatccagactcgggtctcaatggacagctaaagtacatg
atttcaaatggaaacacaaatggcttgttctggatggatgaagatacagggcagctattt
gtaaatgccaccaatgccactgagctgattgggagaacttttgagatggagctgtctgta
gcagacatgggcactcccagctgtaagattgaggcaactctggaggtaactttcatcaat
ctccaggaccacttgaagaactcttcacctggaaaccgagggcaacttagctttactatg
atgatggccatctgcctgagtgccacatgcttgcttcttctgttggccatcgctttattg
acaacattttgccgacccgagaaacgggacaaccgtgcttacaattgcagacaggctgaa
tccagctacacccggcatcctcgaaggccacaaaagaacatcagaaaatctgacatccag
ctaattccagtgatccgagggcgcaaagaagagccgtctgaggaagacagtgaggtccag
cctctcacttctgctccactaccagaagatcaacaaattgagaaagagtataactttata
tcatcggttatgaacaccagtttccattctcaaagctactcggaagtggattctactcaa
catgttggtcatcactgcaaaacacttaggaaacctggaaatattgaaattgatgggact
ttgaccctgacaccagctacatcataccagaccctctgtaaaaccagaaacccttcctcg
tcctcttcttcgctgtcacattttagcactttgaagcgtaataagctgcacccagaaagc
gaagagtcacgtcctcagcgctcgacttcccaggcaactctaaggaggccgaaaatgtca
gatggtcagcaagatgcagaacaccagcaaatgcttagaaacctggttcgtctctccatg
gctgcattcggagacaccatcgagctttcctcagcttcccccgaggtgcagcagatctcc
cagctcctctccctgctccgtcagggtcagctccaaccaaggacaaacttccggggaaac
aagtattcccatcggaacggcagatatggaggtcacgactgctcagattggcagagcacc
aaagacagtggacatggagagagtgaggctggtgatgtggactgggaagcaggaagagac
tcacccatagacccacagctggaagaaggcctcaataacctgctcaacagcccagatgat
gttttctcagagattagtgaccccgcctggatggccaggctctccctgccactcacagcc
gattaccacgacaatgtctttgtccccaacggtcctccgtctcctgaaagcgagattctg
ccgcgggatggactgaactccacctcgtcattctccacctttggtaaaactccagagaaa
gatggccagctgggcggagctttgctgtcagaggtcagcacactgtttgagatgctgatg
actcagaaggccgacgcccacccaggccctcggcctgacatcctgtacaggctgtcagca
gcgtaccaacgctctctgggtttggacgcgacaacagctggaggcagcgccccaaagaac
tgctctgaaaaaaggccggctgtggctggggcctcaaaacatcaataccaatga
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integrated database retrieval system
