Poeciliopsis prolifica (blackstripe livebearer): 129362941
Help
Entry
129362941 CDS
T09758
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129362941 (ssrp1a)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129362941 (ssrp1a)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
129362941 (ssrp1a)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
129362941 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
129362941
NCBI-ProteinID:
XP_054890741
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MGDMLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSNKTGKVDSIPAGELNQAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFEKLSEFFKLNYKMELSEKDMSVKGWNWGTAKFSGPLLS
FDINDHTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVEKRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGNIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDDSDGSGSDE
SFNPGEEDEEIAEEYDSNASASDSSDEGDDSEDESAKKKKAKKAKVVKEKKERKPRKEKK
QKDKAGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLNKDEKEEWESKA
GEAKRQYDKLKKEYKESGGGSTSSPRKEKRKSGGKKDEKKRKSSGGEKEKDRGGNDSFKS
REFIETSDDSSSDSDHKSKSKKKKKKKESEEEEEEEAVSTPASSEEESD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgctagagttcaacgagatctatcaagaggtcaaaggctcatggaatgac
ggacggctgcgtttcagcaaacagaatgtggtttataagagcaacaagactgggaaggtg
gacagcatcccggccggagagctcaaccaggcgcagtggaggcgcgtgtgtttaggccac
ggcataaaactcggcaccagcacggggcacatctacaaatatgacggcttcagggacacg
gactttgagaagctatcagagtttttcaagttgaactataagatggagttgtcagagaag
gacatgtctgtgaagggctggaactgggggacggccaagttctcaggaccgctgctgtcg
tttgatatcaacgaccacacggcgttcgagatccctctgtccaacgtttcgcagtgtgcc
actgggaagaacgaagtcacactggagttccaccagaacgacgacaccgaggtttctctc
atggaggtccgattctacgtcccacccagtcagactgacgaacgacaagaccctgtggag
gcgttcgcccagaatgttttgtcgaaggctgatgtcattcaggccacaggagacgctgtt
tgtatcttcaaggagcttcagtgtctcacgcccagaggaagatatgatattcggatatat
ccgacattcctccacttgcacggtaaaactttcgactacaagattccctacaccacggtg
ctgcgactcttcctgctgcctcacaaggatcagcgccagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcacttcctcattctgcttttttctaag
gaagaggatatcaacctgaccctcaacatgagcgaggaggatgtggaaaaacgctttgag
ggcaaactcagtaaaaacatgtctggctctctttatgagatggtcagcagggtgatgaag
gctctggtcaaccgcaaaatcactgtgcctggaaacttccaaggccactctggcgctcag
tgcatcacctgctcctacaaggcctcttccggcctcctctaccctctggagaggggcttc
atctacgtccacaagcccccggttcacttgcgctttgaggaaatctcctgcgtcaacttc
gccagaggcaccaccacgacgcgctcctttgactttgagatcgagaccaagcaaggaaac
cagtacacgttcagcagcatcgagagggaggaatatggcaagctgtttgactttgttaat
gccaagaagctcaacatcaagaacagaggcttcaaagagggcatgaagggcaacatcgac
gagtacagcgactctgacgaagaccagcacgatgcctacctggagaggatgaaggctgag
ggaaagatcagggaggagggcaacgacagtgacgattcagatggaagtggaagcgacgag
tctttcaatcctggagaggaagatgaggaaattgcagaagagtatgacagcaatgcttct
gccagcgacagcagcgacgaaggagatgacagcgaagacgagagcgcaaagaagaaaaag
gccaaaaaagctaaagttgtgaaagagaaaaaggaaagaaagccacgcaaagagaagaag
cagaaggacaaagctggccccaagaggccgatgagcgcctacatgctgtggctgaactcc
agccgcgagcgcatcaagtcagagaaccccggcatctccatcacagagatatccaagaag
gccggagagatgtggagacagctgaacaaagacgagaaggaggaatgggaatcaaaagca
ggggaggcaaagagacaatatgacaaattaaagaaggaatacaaagagagcggaggagga
tcaacctccagtcccaggaaagagaagagaaaatctggtggaaaaaaagacgagaagaag
agaaagtccagcggtggagagaaagaaaaggatcgaggaggaaacgacagcttcaagagc
cgagagttcattgagaccagcgacgatagttcctccgactccgaccacaagagcaaatcc
aagaagaagaagaagaagaaggaatcggaggaggaagaggaggaggaagctgtatccact
cctgccagctcagaggaagagtctgactga
DBGET
integrated database retrieval system
