Poeciliopsis prolifica (blackstripe livebearer): 129363288
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Entry
129363288 CDS
T09758
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03030
DNA replication
pprl03410
Base excision repair
pprl03420
Nucleotide excision repair
pprl03430
Mismatch repair
pprl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129363288 (pold1)
03410 Base excision repair
129363288 (pold1)
03420 Nucleotide excision repair
129363288 (pold1)
03430 Mismatch repair
129363288 (pold1)
03440 Homologous recombination
129363288 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprl03032
]
129363288 (pold1)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129363288 (pold1)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129363288 (pold1)
DNA replication proteins [BR:
pprl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129363288 (pold1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129363288 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
129363288 (pold1)
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
129363288
NCBI-ProteinID:
XP_054891262
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPLMGGASQAKRGKATGDWEDSPSQFEEELSMFDDVDMDVEDVEGQAGHDVI
PVGDLFSTDLNPRWKRPPAPSLDPSSDTLVFQQIDLDYYLGGSIAGMPGQTQGKVPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPAPSGFTSNYLGEFQKELNSVVLKDMRSNKDNISITV
LAVDICRKESIYGYHGQRSLDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQSYQAYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYSVREERSSTDTVSQTPGKVSLCQYEVDVGWTDFI
SHPAEGEWQKIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKRLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVD
YFPYLGRMRGIKSVLRESSFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEKLGLSPDDFIKTPTGDDFVKSSVRKGLL
PEILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEKTKQLVESKYTVSNGYQADARVVYGDTDSVMVKLGVTTVKEAMEIGR
EAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSPDTHDKMDCKGIETVRRDN
CPLVANLINTCLQKILIERDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGETKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaagcgacgcaacggtggccctctcatgggtggtgcatcccaggccaagcga
ggtaaagcgactggtgactgggaggacagtccatcccagtttgaggaagaattgtcaatg
tttgatgacgtagatatggatgtggaggacgtggaaggacaggctggacatgatgtcatt
cccgtgggtgaccttttctcaacagatctaaaccctcgttggaaaaggcctcctgccccc
tctctggatccatcttcagatacattggttttccagcagattgatctcgactattacctg
ggtggctctatagctgggatgcctggtcagacacaaggaaaagttcctatcattaggatg
tttggtgtaacagatagtggaaacagtgtgtgctgtcatgttcatgggtttgcaccttac
ttctatgttcctgcaccaagtgggttcacatctaattacctgggtgaatttcaaaaagaa
ctgaactctgttgttcttaaggacatgcgctccaataaggacaacatctcgatcacagtg
cttgctgtggacatctgccgtaaagagagcatatatggttaccacggacaacgcagcctt
gatttcttgcggataacgatggcgatgcctcgtctcatcgcacctgcaaagcggctgctg
gaacagggctttaagtttggaccgttccccatccagagctaccaggcttatgaggccaat
atagattttgaaatcaggttcatggtggacagtgatgtcgtgggatgctgctggattgaa
cttcctaaaggcaagtacagcgtgcgtgaagagaggagctcaacagacacagtttctcag
actccaggaaaggtttctttgtgtcagtatgaagttgatgtcggatggacagacttcata
agtcaccctgcagaaggagagtggcagaagatcgctccacttagggtccttagctttgac
atagagtgtgcaggaagaaaaggcatctttccagaaccagataaagatccagtgattcag
atagcctctatggtccaaaggcagggtgaaactgagccattcattcgcacagttttcacc
ctccagtcctgcgctagcattgttggctctcagatattatgcttcactcaggagaaacgg
cttcttcagagctgggcagagttcttgaggactgtggacccagatatcataactggatat
aatattcagaactttgactttccctacttgctcaacagagcagctgctttgaaggtggat
tattttccatatttgggtcgaatgcgaggcatcaaatcagttctgcgagagtcaagcttt
cagagtaagcagatggggcgcagggagaacaagactatcaacatggagggtcgagttcag
tttgatctgctgcaggttcttctaagggattacaaattacgctcctacactctgaatgct
gtgagtttccattttctacaagaacaaaaggaggatgtgcaacattcaatcatcacggat
ctgcagaatggaaacgaacaaactcggcgccgtttggcggtctactgcttgaaggatgcc
tacctcccgctgcgcctgctgcagaaactgatgtgtgtgattaactacatggagatggcc
agagtgacgggagtgcctctcacttacctcctctccagaggacagcagatcaaagttgtc
tctcagctgctgcggcaggctatgaaacaggatctggtaatgcctgttgtgaaaactgag
gggggagaagactacacgggagcaacggttattgagccagaaaaaggctattacagcgtt
cccattgccaccctggacttttcctccttgtatccgtccatcatgatggctcacaatctg
tgctacaccactttgctgcagaaaggctctgctgagaaactgggattgtcaccagatgac
ttcatcaagactcccacaggtgatgattttgtgaagagctctgtgagaaaaggtcttctt
ccagagatcctggagaacctgctgtctgcccgaaagagggccaaagcggagctaaagaag
gaaaccgatcctttcaagaagcaggtgctggatggccgacagctagccctgaaaatcagt
gctaactctgtgtacggcttcaccggggcccaggtgggcaaactgccctgcttggagatc
tcacagagtgtcactggttttggaagacaaatgattgagaaaaccaaacaactggtggag
tccaagtatacagtctccaatggctaccaagctgatgccagggtggtttatggagacaca
gactctgtcatggtcaaactcggagttacaaccgtaaaagaagccatggaaatagggagg
gaagctgctgagtgggtgtcgtcacatttcactccacccatcaagctggagtttgagaag
gtctactacccgtacctgctgatcaataagaagcgctatgcaggcctgtatttctcctcc
agtccagacactcatgacaagatggactgtaaaggcattgagacagtccgcagagacaac
tgccctctagtggccaatcttattaacacttgtctacaaaagatcctcattgagagggat
cctcaaggtgcggtggatcatgcgaaagaagtgatctcagacctgctgtgcaatcgcatt
gacatcagtcagctggtcatcactaaggagttaacgcgtacagcccaggagtacgctggc
aagcaggcacacgtggagctggccgaaaggatgaggaaaagggatgcaggtagcgcccca
aacctgggagacagagtcccctacgtcatcatcaaggctgcaaagggagcagccgcttac
atgaagtcagaggacccaatctatgttctggagaacaatattcccatcgacacgcagtac
tacctggagcagcagctgtccaagccgctgctgaggatattcgagcccattctgggggag
accaaggcagagagcgtcctgctaaagggcgaccacacgcgctgcaagactgtgttgacc
tcgaaggtcggaggcctcatggctttcgctcagaagagaagcacctgcatcggctgcaaa
gctgtgctcaagactgatgctgctgtgtgtgatttctgcaaaaagaaagagtctgaactt
tatcaaaaagagatcttccacctgaatacgttggaggagcgtttctcccgtctgtggact
cagtgccagcgctgccagggttcactccatgaagatgtgctctgcaccagtcgtgattgt
ccaatcttctacatgaggaagaaggttcagaaagatctggatgaccagagcaagcttgtg
tctcgattcggatggtga
DBGET
integrated database retrieval system
