Poeciliopsis prolifica (blackstripe livebearer): 129363508
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Entry
129363508 CDS
T09758
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04120
Ubiquitin mediated proteolysis
pprl04137
Mitophagy - animal
pprl04144
Endocytosis
pprl04340
Hedgehog signaling pathway
pprl04350
TGF-beta signaling pathway
pprl04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129363508
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129363508
04350 TGF-beta signaling pathway
129363508
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129363508
04137 Mitophagy - animal
129363508
09144 Cellular community - eukaryotes
04520 Adherens junction
129363508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129363508
04121 Ubiquitin system [BR:
pprl04121
]
129363508
03029 Mitochondrial biogenesis [BR:
pprl03029
]
129363508
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129363508
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129363508
Autophagy
Mitophagy
Other mitophagy associated proteins
129363508
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
HECT type E3
129363508
Mitochondrial biogenesis [BR:
pprl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129363508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
129363508
NCBI-ProteinID:
XP_054891603
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MLGAIKRLRPPDPFAKVVVDGSGQCHSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNH
KKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKLSPNDSDTVRGQIVVSLQSRDRI
GTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPL
SCIVDENTPVSTNGATPTTALPPSDGDQRVQERRVRSQRHRNYMSRTHLHMHPDLPEGYE
QRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDH
NNRTTQFTDPRLSANLHLVLNPSSNGSRGGSESQNVSRQNQTKDQVQQALVSPGQLPEEA
ECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWK
RLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHL
SYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDND
ITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVSQDNKKEYVRLYVNWRFLRGIEAQFLA
LQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSNTRLKHCTPDTSIVKWFWKAV
ESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRI
DIPPYETYDKLYDKLLTAIEETCGFAVE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtgcaataaaacgtttaaggcctcccgatccgtttgccaaggtcgtcgtggac
ggttcaggccagtgccactccacagacactgtgaggaatacgctcgaccccaagtggaac
caacactatgatctgtacatcgggaaatcggattcaatcaccatcagcgtgtggaatcac
aagaagattcataagaagcaaggggccgggttcctgggctgtgtccgccttctgtctaat
gccatcaaccgccttaaagacacaggctaccagagactagacttgaacaagctgagcccc
aacgacagtgacacagtccgggggcagattgtagtgagcctgcagtcgagggaccgcatc
ggcaccggaggccccgtggtggactgcagtcggctgttcgacaacgaccttccagatggc
tgggaggagaggaggacggcgtctggacggatccagtacttgaaccacatcacacgcacc
acgcagtgggagaggccgaccaggcccgcgtcggagtactccagccccggacggccgctc
agctgcattgtagacgagaacacgcctgttagcacgaacggcgccacgcccaccaccgcg
ttgcctccgagcgacggcgaccagcgagtccaggagaggcgggtgcggtcgcagcggcac
cgcaactatatgagcagaacccacctgcacatgcacccggaccttcctgaaggatacgag
caaaggacgacgcagcaaggtcaagtttacttcctccacactcagacgggtgtcagcaca
tggcatgaccccagagtgcccagagacctgagcaatgtgaactgcgaggaactcggtccg
ctgccgccgggatgggagatccgcaacaccgcgacggggagggtctacttcgtcgaccac
aacaaccgaaccacgcagttcaccgacccgcggctctccgctaacctgcatctggtcctg
aatccaagttccaacggttctcgaggaggcagcgagagtcagaacgtcagccgtcagaac
cagaccaaggaccaggtccagcaggccctggtgtccccgggccagctcccagaagaggcc
gagtgtctcaccgtccccaagtacaagcgggacctggtccagaagctgaagatcctgcgc
caggagctgtcccagcagcagcctcaggccggccactgtcgcatcgaggtgtcccgcgag
gagatctttgaggagtcgtatcggcaggtgatgaagatgaggccgaaggacctgtggaag
aggctgatggtgaagttcaggggtgaagaaggcctcgactacggaggagtggccagggag
tggctctacctgctgtcgcatgagatgctgaacccgtactacgggctgttccagtactcc
cgcgacgacatctacacgctgcagatcaacccggactccgctgtgaatcctgagcatttg
tcgtacttccacttcgtcggccgcattatggggatggctgtgttccacggccactacatc
gacggcggcttcaccctcccgttctacaagcagctgctgggtaaacccatcaccctggac
gacatggagtccgtcgacccagacctgcacaacagcctggtttggatcctggacaacgac
atcacgggcgtgctggaccacaccttctgcgtggagcacaacgcgtacggcgagatcatc
cagcacgagctcaaacccaacggcaagagcatccccgtctcccaggacaacaagaaggag
tacgtccgcctctacgtcaactggcgcttcctgcgggggatcgaggcgcagttcctggcg
cttcagaagggcttcaacgaggtcatcccccaacacctgctcaaggccttcgacgagaag
gagctggagctcatcgtctgcggcctggggaagatcgacatcaacgactggaagtccaac
acgcggctgaagcactgcacgccggacaccagcatcgttaagtggttctggaaggccgtg
gagtcgttcgacgaggagcgccgggcccgactgctgcagtttgtcacaggatcctccagg
gttcccctgcaggggttcaaggcccttcaaggcgctgcaggaccacgactcttcactata
caccagatcgatgccagcaccaacaacctgcccaaagcccacacctgtttcaaccggatc
gacattcctccctacgaaacctacgacaaattgtacgacaagttgctcactgccatcgag
gagacgtgcggcttcgccgtggagtga
DBGET
integrated database retrieval system
