Poeciliopsis prolifica (blackstripe livebearer): 129363538
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Entry
129363538 CDS
T09758
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pprl01001
]
129363538 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pprl04054
]
129363538 (ciita)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129363538 (ciita)
Protein kinases [BR:
pprl01001
]
Serine/threonine kinases: Other
TAF1 family
129363538 (ciita)
Pattern recognition receptors [BR:
pprl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129363538 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
nSTAND3
AAA_16
AAA_22
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
129363538
NCBI-ProteinID:
XP_054891668
LinkDB
All DBs
Position
Unknown
AA seq
1652 aa
AA seq
DB search
MAQFAEVLSQVRLVLTVALPGEVHALLEGLVEEGIISEAYRNSLNLHWLNDGIVPKFTSK
PGHVELDEDLNSLGSVAQLDLNQEPMSQVKTGEAKSLSCVHNVTQTESVSLIEEPKYARF
NLDENKWLQHENLQTNQEDMQELLGEILTDMSDLNQDPLSSLSVYDCTLRSSDEKELLSS
ASSELPSDNESVNMGSEESEEVWLQQVEESARKIAVPLWQHWDRGRGMLQTLLPCVSSSC
SIGDWMMLEGEAQSVILDMEEEVGLAAACRSLDTCVGDFECEEQSCACDTDAGRSEREAL
YFSTLKGVAVLNADNFRTLGATRNASPVEACKATEEGHIAQMLEGQFDVLCPVGKMADKV
DDLFCFTADAQYQQRGTRSGLSVTSFRDLLHSDVPEDSRTVLQDISHYSLTEGITDYLED
AEMFHVDQDREFQEKTDLHCDAKMQGHDQDSLDLSDLVSGYIADLLGDEDFLASELDPNV
LFSHDLGPDCFDDITQNSDTAVPLGVSDSADHNVQREKRKPTDKIKPRRKRQRDALSTQC
TSGNSRVKRQKATEPPKTQGETAEQPAIHDAEAVSVPAESVGCLPTTPPGNLLVFPPQSA
NSIPIQFITIPDPSAYKVVQLSSSPPPLIRLPLQNAAATPTYIFVPNPSPTRTRQVPPLS
PADGAVAPFLMSSFQPGSMSDTASKVTSPTAAPPSPTNEVSPCKESPKSPVVMEIPQSVK
DYIQQSKLHMSQACQYMEAGLRLSAHYVNVSVSQREIAHSGKNTNRCLDKELIITGDIDR
QKSSMGQSQIFDSLNGKRYNVLFGNAGMGKTTVIKKLCLDWSRDCIPQFDFVFLLDGKQL
ALTEPVHSLQTLLLSQSSFAPHCADPEGVYAQILAAPKRVLIVFDGFDELRHYEILLQTQ
KKELVASLQKDSKAQAFTVKQLFSSILQRVLLPGCTLLLATRPRGTASQLLRRADSFLEV
CGFTPANVETYVSQYFSDPELRESALDFLKSSSYLNLLCWNPGLCLLVCTALEQCKSEDA
LPRTLTALCHKVLCLKMEKDRGSTESLPEAEKINTVEPVENTDISNNSPARRVQKNNRAR
PRAVACAPSGNQRARKTKGQKKLDEESVCQDTNRTELLSQLCSIAWEGVKSNSSVVPKGR
TVSTKLRAFSLRTGLLLSQSLMKRTPSKEEMEGGGEVNNGIEEVEDKENKDKGGNPQTSD
ECEDGILSWANPFLQSYMAAVHLSLSRSVTDHSFLQTLPFQMGAKGRRRPQREEMELTQR
IAAGLLFHNKTELQSLHSYSETVFRDMVASKQALVMKHLEGLCFGDLNSAQILEACNYVY
EASFTHQESGKDTSAKMLTYLASNLPELLTFRGVPLNPPDVFTVQNALRMGGAEGRSFCL
DLEDSGIQICGLRTLVALSNINTYRACIADVVTLWEELEKTSDEGLLRGAVSKFKIHPLK
ATQVCHIEHLERLVGIHTSKRLSDSSGQSNPLLADGVPAVKELHKLEFELGPENSPLALP
KLWDLLPGLHNLQHLEVENSKIGDKGAEKLANALVSLRSLEVLNLSENCIGDQGVKKLAL
ALKDLPKLHCLSLYSNVISDEGAESLAAVLPHMASLTDLDIKYNKMTDIGAQSLGASLRK
CSKVKTLRMWNQCIPYGVFERLKQQDSRILWQ
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtttgccgaggtcctcagccaggtgaggttggttcttactgtggcgctgccc
ggcgaggttcacgctctgctggagggtctggtggaagaggggatcatctcggaggcatac
aggaacagtttgaatctgcactggctcaatgacgggattgtgcctaaattcacaagtaaa
ccaggacatgtggagctggatgaggacttaaattctctaggatcagtggctcagttggac
ctcaaccaagaaccaatgagccaagtgaaaacaggcgaagcgaaatctctttcttgtgtc
cacaatgtgacacaaaccgagtcggtttcattaatcgaggaaccaaaatatgcaagattt
aacctggacgagaacaagtggctccaacatgaaaaccttcagacaaaccaggaggacatg
caggagttattgggtgaaattctaactgacatgtccgacttgaatcaagaccctctttcc
tcactgtcagtgtatgactgcactctcaggtccagtgatgaaaaagaactgctgagcagt
gcaagcagtgagcttcctagtgataatgaaagcgtaaacatggggagtgaggaaagtgag
gaggtgtggttacagcaagtagaggaatcagcaaggaaaatagctgttcctctgtggcag
cactgggaccgagggcgagggatgctgcagaccttgctgccatgtgtttcaagcagctgt
tcaataggtgactggatgatgctggagggtgaagcccagagtgtcattttggacatggag
gaggaagtggggcttgcagccgcttgccgttcgcttgacacctgcgttggcgactttgag
tgtgaagagcagagctgtgcgtgtgacacagacgcaggcaggtcagaacgagaagcgctt
tacttctctaccctcaaaggagttgctgtgttgaacgcggacaacttcaggaccctcgga
gcaacgagaaatgcgtcacctgttgaagcctgcaaagcaactgaggagggacacatcgcc
caaatgctggagggccaattcgatgttctgtgtccagtcggcaagatggcagacaaagtg
gacgacctgttctgttttacagcagacgcacaatatcaacaacgtggaacacggtcagga
ctgtctgtgacctctttcagggacctgctccattcagatgtgcctgaagacagcagaact
gttctgcaagatatctctcactatagtctcacagaaggaataacagattatctcgaagat
gcagaaatgtttcatgtggaccaagacagagaattccaggaaaagacggatttacattgt
gatgccaagatgcaaggacacgaccaggactccttggacttgtcggatttggtttcaggt
tatatagcagaccttttgggggatgaggactttcttgcttctgagctggatccaaatgtg
ctcttcagtcatgatctggggcctgactgctttgacgacatcacccaaaacagtgacacc
gctgtgccattgggggtctctgatagcgctgaccacaacgtgcagagagagaagaggaag
ccaacagacaaaataaaacctaggagaaaaagacagagagatgccctgtctacacagtgc
accagtggaaactccagagtgaaaaggcaaaaagcgacagaaccaccaaaaacccaggga
gaaactgctgagcagcctgcaattcatgatgctgaagcagtgtcagttcccgcagagtct
gtgggatgccttcccaccactcctccaggcaacctcctcgtgttcccacctcagtcagct
aactccattcccattcagttcatcacaatcccagacccctctgcttataaggtggtccag
ctttcctcctctcctcctccgcttattaggctccccctccagaacgcagctgctacgcca
acgtacatcttcgttcctaatccctctccgacccgcacacgccaggttccaccgctctct
ccggcggacggtgcagtggcgccctttctgatgagttcatttcagcctggttccatgtca
gacacagccagcaaagtcacgtcccccactgcagctcctccgtcccccacaaacgaggta
tccccatgtaaggagtcgccaaagtcccctgtggtcatggaaatcccccagtctgtgaag
gactacatccagcagtcaaaattacacatgagtcaggcttgccagtacatggaggcaggc
ctgaggctgagcgcccattacgtgaacgtgagtgtgagccagagagagatcgctcactct
gggaaaaacacgaatagatgtctggacaaggagctcatcataactggagatatagaccgc
caaaagagctccatggggcagagtcagatctttgacagcctgaatgggaaacgctacaac
gtgctgtttggcaatgctggcatggggaaaaccactgtgatcaagaagctgtgtctcgac
tggtccagagactgcatcccccagtttgactttgtcttcctattagacggcaaacagctc
gctttaacagagcccgtccacagcctccagacgctgctgctcagccagtcctccttcgct
ccacactgcgcggatcctgaaggagtttacgctcagatcctcgcagctcctaaaagggtg
cttattgttttcgacggatttgacgagctgcggcactacgaaattctgctccagactcag
aagaaggagttggtggcctcgctgcaaaaagacagcaaagcccaggccttcacagtgaag
cagctgttctccagcatccttcagagggtcctgctcccaggctgcacgctcctcctcgcc
acccgcccaagaggcacggccagccagttgctccggcgcgcggacagcttcctggaagtc
tgcggcttcactccagcgaacgtggagacgtacgtttcccaatacttctccgaccctgaa
cttagggaatcggctttggacttcttaaaaagcagcagctacctgaatctcctctgctgg
aacccgggtctctgcctcttggtgtgcacagcgttggaacagtgcaaaagtgaggatgcc
ttacccagaactttaactgcgctctgtcataaggtgctctgcttgaagatggaaaaagac
agaggaagcacagagtcacttcctgaggccgagaaaataaacacggttgaacccgtggaa
aatacagacatttctaacaattcccctgcgaggagagtacagaaaaataatcgcgcaagg
cccagagcggtagcgtgcgccccttctggtaaccaaagagcaaggaagacgaaaggacag
aagaaactggatgaggagagtgtttgccaggacactaacagaacagagttgctgtcccag
ctttgctctatagcctgggagggagtgaaatccaactcatctgttgttcccaaaggacga
actgtctccaccaaactcagagctttcagcttgaggacgggcctgctactttctcagtcc
ctcatgaaaaggacaccttccaaagaggagatggagggaggaggagaagttaacaatggg
atagaagaagtggaggacaaggagaacaaagacaagggaggaaatccacaaacatctgat
gaatgtgaagacgggatcctgtcgtgggctaatcctttccttcagagttacatggctgcc
gtccatttgtctttgtcaaggtctgtgacagaccactcctttctccagaccctgcccttc
cagatgggtgcaaaaggccgacggagacctcagcgagaagaaatggagctgacgcagcgg
atcgctgcaggcctcctgttccacaacaagacagagctacagagtctccattcatactcg
gaaacagtcttcagggacatggttgccagtaagcaggcattggtgatgaaacacctggag
ggtctgtgctttggggatttgaattcagctcagatcctggaggcgtgcaactacgtctac
gaagcaagtttcacgcaccaagagagtgggaaagacaccagtgccaaaatgctgacttat
ctggcatcaaatctccctgaactcctaacatttcggggcgttcccctcaacccgccagac
gtgttcacagtgcaaaacgctctcaggatgggtggagctgagggcaggagtttctgtttg
gacctggaagactctgggattcagatctgtggacttagaacgttagtggccctcagcaac
atcaacacatacagggcctgcatagcagacgtcgtcactctgtgggaggagctggagaag
acgagcgacgaaggtctcctgcgaggagcggtgtccaagttcaagatccatcctctgaaa
gccactcaggtctgtcacatagagcacctggaaaggctcgtcggcatacacaccagcaag
aggctctcggacagctccggccaatcaaatcctctcctggcagacggggtgccagcagtg
aaagagctgcacaagctggaatttgagctcggcccagaaaacagtcccttggctcttccc
aaactgtgggaccttctccctgggctccataacctgcagcacttggaggtggaaaacagt
aagatcggagacaaaggggcagagaaactggcaaatgcgttggtctcccttcgctcactg
gaagtactaaatttgtccgagaactgcataggtgaccagggcgtgaagaagctagctctc
gccttgaaggacctgcccaagctgcactgtttaagtctgtacagtaacgtgatttccgac
gaaggggcagagagtttagcagctgtcctcccacacatggcttcactcacagacctcgac
attaaatataacaagatgacggatattggagcacaaagcctgggagccagcttgagaaag
tgctctaaagttaagactttgaggatgtggaaccagtgtatcccatatggagtttttgag
agactcaagcagcaggacagccgcatcctctggcaataa
DBGET
integrated database retrieval system
