Poeciliopsis prolifica (blackstripe livebearer): 129363542
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Entry
129363542 CDS
T09758
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129363542
03015 mRNA surveillance pathway
129363542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129363542
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129363542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
129363542
NCBI-ProteinID:
XP_054891674
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MAPSPTKRKEDEKTKDRGKEKTGTKDGDKERGREKVRKRRSASSGSSSSSRSSSSSSSSS
GSSSGSSSGSSSSGSSRTGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSPSKAQKRGDD
KDRRKRSPTPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMIDMPADRLHPHLPKGYAYV
EFETAEEAAKALKHMDGGQIDGQEISAAAVLTQRVRLPPRRLSPPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcacctacaaagcggaaggaggatgagaaaaccaaagatagaggtaaagag
aagactggtaccaaggatggagacaaggagagggggagggagaaagtgaggaagcgccgt
agtgcttcgtctggcagcagcagcagcagcagatcaagctcatcgtccagcagtagctca
ggttccagctcaggttcctcaagtggctccagctcttctggctccagccgcaccggatcc
tcaagctctcgttcatcctcctcatccagctcctcaggctccccgagccccagtcgcagg
cgccatgataaccgtcgccgctcccgctcaccctctaaagcacagaagaggggagatgat
aaagaccgaaggaagcgaagccccaccccaaaaccgaccaaggttcacttaggaaggctg
accaggaatgtgaccaaggaccacatccaggaaatcttttctacttatgggaaaataaag
atgatagacatgcctgcagataggctccacccacacctgcccaaaggctacgcttatgtg
gagtttgagactgccgaagaggctgcgaaggccctgaaacacatggacggaggtcagatt
gacggacaggaaatcagtgcagctgctgtgctgactcagcgggttcgtcttccacctcgc
agactgtctcctcctcctcggcgaatgccccctccaccaccaatgtggcgccgcagcccc
ccacgcatgaggagaaggtctcggtccccgagaaggcggtcccctgtacgccgccgctct
cgctccagatcccccggtcgcagacgccaccgctctcgctccagctccaactcctccaga
taa
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