Poeciliopsis prolifica (blackstripe livebearer): 129363640
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Entry
129363640 CDS
T09758
Symbol
ush1ga
Name
(RefSeq) pre-mRNA splicing regulator USH1G isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129363640 (ush1ga)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129363640 (ush1ga)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
129363640
NCBI-ProteinID:
XP_054891835
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVSRGGNPDK
CDIWGNTPLHLAAANGHLDCLFFLVSFGANIWCLDNDYHTPLDMSATKNHMDCVRYLDSI
ATKQTGLNPKLVSKLKDRAFRDAERRIKECAKMQKKHRKRMERKFHKETSEASASDVMSF
SSYTGSSVSHRLRNFSTATISVPYSQATLHATNRGKTKIQKKLEKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYINPKDRGRRNVRDMFPRDNNDAISRAMSEPDLLGPDM
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFNLGARDTTRSGNNVRLRSRLQHYPS
IDEDSIGSARSLQERNMEELPWEEVELGLDDDDEPDTSPLEVFLATLSMSEFYSIFKREK
IDLEALLLCSDQDFKSIHIPLGPRKKLLDACQRRLETMEDPDSIEDTEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtatcacaaggcggcccgggacggctacctggacctgctgaaggaggcg
acgaggaaggatctgaacgcgccggacgaggatggcatgacaccgactttatgggcggcc
taccacggcaacctggaggctctgcggctgatcgtgtccaggggaggcaacccagacaag
tgtgacatatgggggaacacaccactccacttggcagctgccaatggtcatctcgactgc
ctattctttctggtgtctttcggtgccaacatttggtgcctagacaatgactaccacacg
cccctggacatgtccgccacgaagaaccacatggactgtgtccgctacttggattccatc
gctaccaagcaaacaggactaaatccgaaactggtcagcaaactgaaggaccgggcattt
cgtgatgctgagcgacggatcaaagagtgtgctaagatgcagaaaaagcaccgcaaacgc
atggagagaaagtttcacaaagaaacctctgaggcttctgcttcagatgttatgagtttc
tccagttacactggcagctccgttagccacaggctacgtaactttagcacagccactatc
agtgtgccatattctcaggcaactctccatgccacaaaccgagggaagacaaagattcaa
aagaagctggagaagagaaagcaaggagatggaacttttaaaatttacgaagatggaaga
aagagtgtgcgctccctttctggacttcagttaggtaatgatgtcatgtttgtcaagcag
gggacttacatcaacccaaaagacagagggcgtcgaaatgttcgagacatgttccctaga
gacaacaacgatgccatttctcgtgccatgagtgagccagaccttcttggacccgatatg
gactactctgagatcagcacagactctggacatgattccctgtttaacagaccaggtttg
ggcaccatggtttttagaagaaactatgtaagtggaggaatgttcaaccttggtgctcga
gacacgactcgctcaggtaataatgtgcgtttacgcagtcggttgcagcactacccaagt
atagacgaagacagcattggaagtgcacgcagcctgcaggaaagaaacatggaagagttg
ccttgggaagaagttgaattagggttggatgatgacgatgagcctgatacaagccctctg
gaggtcttccttgccacactaagcatgagcgagttttattccatattcaaaagagagaag
attgacttagaagctctcctgctttgctctgatcaagactttaagagcattcatatcccg
ttagggccaagaaaaaagctattggatgcgtgccagagacgactggagactatggaggac
ccagactccattgaagacactgaattgtaa
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