Poeciliopsis prolifica (blackstripe livebearer): 129363884
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Entry
129363884 CDS
T09758
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129363884
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129363884
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129363884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
129363884
NCBI-ProteinID:
XP_054892187
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDDEPQGAPESATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPNVKCAVFFGGLAIKKDEDTLKKNCPHIVVGTPGRTLALIR
NKTLSLKNVKHFVLDECDKMLEALDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALSQLLVEQNFPAIAIHRAMVQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgacaacgagctgctcgattatgaggaggatgatgagccacaa
ggagccccggagagcgcaaccccggcggggaagaaggaggtgaaggggtcctacgtttcc
atccacagctccggcttcagggacttcctgctgaagccagagctcctccgggccatcata
gactgtggtttcgagcatccgtctgaagtccagcatgagtgcatcccccaggccatcctg
ggcatggacatcttgtgccaagccaagtctggtatgggcaagacggccgtgttcgtcctg
gccacgttgcaacagatcgagcccgttgatggacaggtctctgtgttagtcatgtgccac
acacgagagctggccttccagatcagcaaagagtacgagcgcttctccaagtacatgccc
aacgtgaagtgtgccgtgttcttcggcggcctggccatcaagaaggacgaggacaccctt
aagaagaactgccctcacatcgtggtcgggacccccgggcggaccctggctctgatccgc
aacaagaccctgagtctgaagaacgtcaagcatttcgtcctggacgagtgcgacaagatg
ctggaggcgctcgacatgaggcgcgacgtgcaggacatcttcaggatcaccccccacgag
aagcaggtcatgatgttcagcgctacgctgagtaaggagatccggccggtctgccgcaaa
ttcatgcaggacccgatggaggtgtttgtggacgacgagaccaaacttacgctgcacggt
ctgcagcagtactactgtaaactgaaggacagcgagaaaaaccgcaagctctttgacctg
ctggacgtcttggagttcaaccaggtggtgatctttgtcaagtccgtgcagcgctgcatc
gctctgtctcagctgctggtggagcagaacttccccgccatcgccatccacagagcaatg
gttcaggaggaaagactctctcgctaccagcagttcaaggacttccagagacggatcttg
gtggcaaccaacctgtttggccgagggatggacatcgagagggtgaacatcgtcttcaac
tacgacatgcctgaagactcagacacctacttgcacagggtcgcccgtgccggtcggttc
ggaaccaaaggcctggccataaccttcgtgtcggacgagactgacgccaagatcctgaac
gacgtgcaggaccgctttgaagtcaacgtggccgagctgccggacgagatcgacatctcc
tcttacatcgagcagtccagatga
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