Poeciliopsis prolifica (blackstripe livebearer): 129363924
Help
Entry
129363924 CDS
T09758
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129363924 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprl01007
]
129363924 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprl03016
]
129363924 (farsa)
Enzymes [BR:
pprl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
129363924 (farsa)
Amino acid related enzymes [BR:
pprl01007
]
Aminoacyl-tRNA synthetase
Class II (U)
129363924 (farsa)
Transfer RNA biogenesis [BR:
pprl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129363924 (farsa)
Prokaryotic type
129363924 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
DUF5953
MarR_2
HTH_11
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
129363924
NCBI-ProteinID:
XP_054892250
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MADTGVVEALLQRIEKVDGGVDSLEVAASLGVDHQAIVGAVKSLQALGDVISAELRSSKH
WELTEEGTEIVEQGSHEARVFSSIPPEGLPQAELMKLSFGKIGFSKAMSNKWIRVDKSHD
GGPRIFRTADGVQDQVREKLLLAKRGDAARLDEKEKNELKKRKLLAEVTVKSYWITKGNS
FSTTVTKQETELTPEMIASGSWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLE
MGFSEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPALAHHFPMDYLERVKKVH
SEGGYGSQGYKYDWKMEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGVLHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPICRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggtgtggtggaagcgcttcttcagcggattgagaaggtggacggcggc
gtggacagcctggaagtggccgccagcctcggggtggatcaccaggccatcgtgggagcc
gtgaagagtctgcaagcgcttggcgacgtaatctccgcggagctgcgctcctccaaacac
tgggagctgaccgaggagggcaccgagatagtggagcagggcagccatgaagcccgggtc
ttcagctccatccctccggagggtctgccacaagccgagctcatgaaactctccttcggg
aagatcggcttcagcaaggccatgtccaacaagtggatccgcgtggacaagtcccacgat
ggaggccccaggatattcagaaccgcggatggcgtacaggaccaggtgagggagaagctg
ctgctggccaaacggggcgacgccgcgcggctcgacgagaaggagaagaacgagctgaag
aagaggaaactcctggctgaagtcactgttaagtcttactggatcacaaagggaaactcc
ttcagcaccacggtaaccaaacaggagacggagctgactcctgagatgattgctagtggc
agctggaaagagaagaagttcaagccgtacaacttcgaggcgatgggcgtggcccccgac
tgcggacacctccaccctctgatgaaggtgcggacgcagttcaggcagatcttcctggag
atggggttttccgagatgcctaccaacaacttcatcgagagctccttctggaacttcgac
tccctgttccagcctcagcagcacccggccagagatcagcacgacaccttcttcctgtcc
gacccggcactcgctcaccacttccccatggactacctggagagagtgaagaaggtccac
tcagagggcggctacggctcgcaagggtacaaatacgactggaagatggaggaggcccag
aagaacatcctccgaacgcacactacagctgttagcgcgcgcatgctgtataagctagcg
caacaggaaaagttcacccccgtcaagtatttctccatcgaccgggtgttcaggaacgag
acgctggacgccacccacctggcagagttccaccagatagagggggtggtggccgactac
ggcctcacgctgggcgacctgatgggggtgctgcaccagttcttcaccaaactgggaata
accaaactgcgcttcaagccagcctacaacccctacacagagcccagtatggaagtgttc
agctaccatgaagggctgaagaagtgggtggaagtgggaaactctggggtgttcaggcca
gagatgctgctgcccatgggcctcccagaggacgtgtcggtcatcgcctggggtctgtct
ctggagaggcccaccatgatcaaatacggcatcaacaacatcagagagctggtgggacac
aaggtgaacctgcagatggtctacgacagcccaatatgtcgactggactcctga
DBGET
integrated database retrieval system
