Poeciliopsis prolifica (blackstripe livebearer): 129363978
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Entry
129363978 CDS
T09758
Symbol
lingo1b
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129363978 (lingo1b)
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129363978 (lingo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
Ig_C17orf99
LRR_RPS2
LRR_R13L1-DRL21
LRR_Zer-1
LRR_LRWD1
LRRNT
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
129363978
NCBI-ProteinID:
XP_054892302
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MTVLVSSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSKCDCNGQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNELKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLENLNIEGYKLGSVPTDALSHVHNLLSLRLRYLNVTDIRDFSFKRLY
RLRVLEISHMPALNTMASQSLYGLNLTSLSVTNCNLSTIPYEAINHLRYLRFKSIFQSYS
YCXGNQLFSLQKLQAFHLAGGQLVAIEPYSFRGLNHLRILNVSRNSLSTLEESVFHSXGN
LETLALYENPLAXDCRLLWVFRRRWRLNFNKQQPICASPKIVQGKEFKDFPDVLPPDYFI
CQKSKIVDYKVVESHVDEGTTVHFTCMAEGDPTPVIMWLSPKKEYITTKTIGSRLSVSSE
GTLEVRYAQXQDNGTYLCIASNAAGNDTKAAHLFVXHSPNWPHQPNKSFAFISNQPSDEG
ANVTRTTVPFPFDVKTLIVATTMGFISFLGVVLFCLVILFLWSRGKDSTKSTIEVEYVPR
KEETEEASPTEAPVQFNMKIM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgtccggagaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctgatgctgggcaccgtcctttcaggctccacc
actgggtgcccttcaaaatgtgactgcaatggccaggagcgttcagtcgtctgtcatcga
agaaggctggcagcacttcctgagggcatccccactgaaactagattgctagacctcagc
aaaaaccgtctgaagactctagggcctgaggagttcattaattaccctcagctggaggag
ctgcaactgaacgaaaatactatttcatccattgagcctggggctttcagtaacctaatg
aaccttcgaacgctaggcttgcgcaacaacgagctaaagctcattcagcttggagtgttc
acaggcctgaccaatctcacacagttggatataagtgagaacaaaattgttattttgctc
gactatatgttccaagagctgtacaacttgagggctttggaagttggggacaatgaccta
gtctttatatcgcctcgatcatttcatggtctgagcaatcttgaaaacctcaacattgaa
gggtataaactgggctcagttcccactgatgcccttagtcatgtacataacttgctatcc
cttcgattacgctatctgaacgttaccgatataagggacttctcctttaaaagactgtat
cgactaagagtactggagatttctcatatgcctgctttgaatacaatggcttcacaaagc
ttgtatggacttaacctcacatcattgtctgtcacaaattgcaatctgtctaccatcccc
tatgaagccatcaatcatctcagatatcttcggtttaaatctatctttcaatcctattca
tactgttaaggtaaccaacttttcagtcttcaaaaactccaggcatttcacttagctggt
ggacaattggtggcaattgagccttactcattccgtggactcaaccacctccgtattctt
aacgtgtcaagaaatagcttgagcacccttgaggagtccgtttttcactcanngggaaac
ctggagaccctggctttgtatgaaaaccctttggctnntgactgccgcctgctatgggtc
ttccgcaggaggtggaggcttaacttcaacaaacaacagcccatttgtgcttcacctaag
attgtgcaaggaaaagagttcaaagatttcccagacgtactgcctccagactacttcatc
tgtcagaaatcaaagattgtggattataaggttgtggaaagccacgttgatgaaggaact
actgttcacttcacgtgcatggcagagggtgatccaactccagtgataatgtggctatcc
cccaagaaggagtacattactacaaagactatagggtcaaggctctcagtatccagcgag
ggtacactggaggtacgctatgctcaanatcaggacaatggcacctacttgtgcattgcc
agtaatgctgctggcaatgacaccaaagctgctcacctttttgtancacactccccgaat
tggccacatcagccaaataagtcatttgcttttatttctaaccagccaagtgatgaaggt
gctaatgtgaccagaacaacagttccatttccatttgatgtaaagacacttattgtcgca
accacaatgggatttatctcattccttggagtggtcctcttttgtcttgtaattttattc
ctctggagtagaggaaaagacagcacaaagtcaactattgaagttgaatatgtgccacga
aaagaggaaactgaggaggctagtccaactgaggcacctgtacaattcaacatgaaaatc
atgtga
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