Poeciliopsis prolifica (blackstripe livebearer): 129364033
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Entry
129364033 CDS
T09758
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129364033 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129364033 (copb1)
Membrane trafficking [BR:
pprl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129364033 (copb1)
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129364033 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
129364033
NCBI-ProteinID:
XP_054892399
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVTSDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKDHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKETGELKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFFVAASLATTLTKLALRYVSIVQDKQKQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVTGHIRIRAKSQGMALSLGDKINLSQKKANI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagaaaatgtttgttacactctgataaatgtaacctctgactcggagccc
ccttctgaagtcagcttaaaaactgatctggaaaagggcgagatcaaagcaaaaactgaa
gccctgaagaaggtcatcatcatgatcctgaatggcgagaaattgccaggacttctgatg
accattattcgctttgtgctgccacttcaagaccacaccataaaaaagcttctgctggtt
ttctgggagattgttcccaaaacaactccagatggcaagctgctgcaggagatgatcctg
gtctgtgatgcctacaggaaggacctgcagcatcccaacgagttcatccgtggctccacc
ctccgtttcctctgcaagctgaaggaatctgagctcctcgagcctctgatgccagctatc
cgggcttgcctggagcaccgccacagctacgtccgccgaaatgctgtccttgccatttat
actatctataggaacttcgaacatctcatcccagatgctccagagttgatccatgatttt
cttgtcaatgaaaaagatgccagctgtaagagaaatgccttcatgatgctgattcatgca
gatcaggatcgagcccttgattacctcagcacatgtatagatcaggttcatacattcggt
gacatcctgcagctggtcattgtggagctgatatacaaggtttgccatgctaatccatcg
gagcgcgcccgctttatccgatgcatctacaatctgctgcagtcttcgagtccagctgtt
aagtatgaagctgctgggactcttgttactctctccagtgctcccacagccattaaggct
gctgcgcagtgttacattgatttgatcatcaaggagagcgacaacaatgtcaagctgatc
gttctcgaccgtctgattgaactgaaggaccatccaactcatgagcgcgtacttcaagat
ctagtgatggacattctgcgcgtcctcagcacccctgatctggaagtcagaaagaagacc
ttacagctggccctggacctcgtctcctctcgtaatgtggaagagttggtgattgttctg
aagaaggaggtgattaaaacaaacaatgtaacggagcacgaagacactgataagtacaga
cagctgctggttcgcactctccactcgtgcagtgtgcgcttccctgacatggcagctaat
gtcatacctgtgctgatggaattcctgagtgacactaatgaggcagctgctgctgatgtg
ctggagtttgtgagggaggccatccagaggttcgacaacttaagacctttgatcatcgag
aagatgctggaggtttttcatgccattaaaacagtcaagatttacaggggagcactctgg
attttaggagaatactgcagtactaaggaggacatccagagtgtgatgactgaagtacgc
aggtctctaggagagatcccaatagtggagaatgagattaaaaaagagacgggtgagttg
aaaccagaggatgaagtaagcgccgctccagctcagaagctggtgacggagatgggaacc
tacgtgacacagagtgccctgagctcctccaggccttcaaagaaagaagaggacaggcca
ccactccgaggcttcctaatggatggagacttctttgtggcggcttccttagccacaaca
ctcaccaaattggccctgcgttacgtttcaattgttcaagacaaacagaaacaaaattca
tttgtagctgaagccatgctgattatggtcacagtgcttcacctgggcaagtcctcactg
cccaagaagccaattacagatgatgatgtggaccgcatctcgttgtgcctgaaggtcctg
tcagagtgctcaccacttatgaatgacattttcaacaaggaatgccgcagatccctgtcg
catatgctcactgtcaggctggaggaggagaagctgtcacagaagaaagaatctgagaaa
cgaaacgtgaccgtgcaagcagacgacccgatctccttcatgcaactcacagccaaaaat
gagatgacctctaaggaggaccagtttcagctgagcttgctggctgctatgggtaacact
cagaggaaggaggctgctgacccacttgcatcaaaactcaataaggtgacccagctgact
ggattctcagacccagtgtacgctgaagcctatgtccatgttaaccagtatgacattgtg
ctggatgtgctggtggtcaaccaaacaagcgacactcttcagaactgcactcttgagttg
gccactttaggggatctcaagttggttgaaaaaccttcccctctaactctggcccctcat
gattttgcaaacataaaggctaatgtcaaggtagcttctaccgagaatgggattatattt
ggcaacattgtctatgatgtgtccggagctgctagcgacagaaactgtgttgtcctcagc
gacattcatattgacatcatggattacatccagccagcctcctgcacagatgcagagttc
agacagatgtgggcagagtttgaatgggaaaacaaggtcacagtaaacaccaacatcact
gatctgaatgaatatcttcagcatatccttaagtccacgaacatgaagtgtttgactcct
gaaaaggcactctccggtttctgtggcttcatggccgctaatctgtatgctcgctccatc
tttggggaagatgccctggctaacgtcagcatcgagaagcccattcacctggggcccgat
gcaccggtcaccggacacatacgcattagggccaaaagtcagggaatggcactgagcctc
ggtgataagatcaacctctctcaaaaaaaggctaatatctga
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