Poeciliopsis prolifica (blackstripe livebearer): 129364050
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Entry
129364050 CDS
T09758
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129364050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129364050
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129364050
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
HECT type E3
129364050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129364050
NCBI-ProteinID:
XP_054892427
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MFCWGEDYRRSFRQKKASDVPTSDRVHFLNLSFHIRDLSAARNVLAFAKDVGDASVIRAQ
GKQKFVDCGEKIRAVCCGDDVVTLLSDAGKIFCVDPNATPFTPRPPPVLSSVTVTQIACG
SHHTVALTKDDQVYTWGQDSRGQLGLGGSHSGAGSPQHVRSLSAIPVVRISAGGEHSFAL
TVSGGVFGWGRNDCGQLGLGDTEDRTTPAPVSYLNTKKVIHISSGQEHTVALTKDGAVFT
FGSGRYGQLGHNSFRNELRPRLVAELWGAKVTKTACGRYHTLVLTDRMKVYSFGCNDHQQ
LGRDEESLSVPLPVQIPLCPTNGHRIDNIFAGADCSFATWRPKEDGLNSKINITQQPIEN
LVDQWTSECDARLGQVTKQEIRRTFSSASIVNRSFLDQRKDKHFQTSTNYPGFDLLLAKS
VFEKLLTEDVLQTEVEKAVLLLLPRLDNKPVGLEGLRVFLVLTELLHVTQKHCQPQISST
SLKLVEEIIAAFQRLSPESLRIIGDWWHSLLPSTMVRHVNVWKTALSWPFSHNSFNSILL
ILQNLFEANRKKIPENKFCVEFDRTFLEVELQRWRGMSLNRSLFPQMVDDQPLLLCDFPF
VMDLKSKKMVFDTSAAWTQEDHQRVFVPPFGGTTQSNPYFELHLSRASLLEEAFAQLAAA
HQTDLKKPLVVHLDGDSKVTRVYRSDFFHHLNIVQEKREMFMLNESERLAWFSSRADQAN
FHLLGILCGLALYNDSFIQLPFPLVLFKKLLDIEPTLEDMMEFNAGVGRHLQYILDYEDD
LEDLCITFEINWDERNVDLDPSNPGKLVTNQNKKEFVDAYVNYAFNQSVEGMFQEFKHGF
FLVCDQQLVKLFRPEELQGVLVGGDVYNWAKLKQNTQYEWISDRHPTMQMFWDVFDELTE
EQKKDFILFLTGFRKVPVLGMDQIRMKIRIKQIQSGSPDEHFPESLTCHSILELPLYSTK
EIMRERLTEALEPDRGFRA
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgttttgctggggtgaggactatcggcggagcttccgccagaaaaaggcctcggatgtc
ccgacttcagaccgagttcatttcttgaacctcagctttcacatccgggacctttctgcc
gcccgcaacgttctcgctttcgccaaagacgtcggagacgcgtctgtgatccgcgcgcag
gggaagcagaagtttgttgactgtggcgagaagatccgcgctgtttgctgtggggatgac
gtggtcacgctgctctctgacgcagggaaaatcttctgcgtggacccaaacgccactccg
ttcactcccagacctccaccagtgctgtccagcgtcacagtgacccagattgcttgtggg
agccatcacactgttgcactcaccaaagatgatcaagtgtacacatggggccaggactcc
aggggccagctgggactgggagggagtcattctggagccggttcacctcaacacgtcaga
tctctgtcggccatccccgtggttcggatctctgcgggaggagagcatagctttgctctc
accgtgtctggaggcgtgttcggctggggcagaaatgactgcggacagctcggactggga
gacactgaagatagaactacaccagcgccggtcagttatctgaacacgaagaaagtcatt
cacatttccagtggacaggaacacactgtggctctgacaaaggacggtgccgtgtttacg
ttcggctccggccgatacggacagcttggacacaactcattccgaaatgagcttcgtcct
cggcttgttgcagagctctggggggcaaaggtcaccaaaactgcatgtgggagatatcac
acattagtgctgacagaccgtatgaaggtgtattcctttggttgcaacgaccatcagcag
ctgggacgtgacgaggagagcctgtctgtgccactacctgtacaaatacctctctgtccc
acaaacggtcaccggattgataatatctttgctggagcagattgttcgtttgcaacctgg
agacctaaagaggacggattgaactcaaagatcaacataacgcaacagcctattgaaaac
ctggtggatcagtggacctctgaatgtgatgcaaggttgggacaagtgacaaaacaggaa
attcgtagaacattttcctctgcttcaattgtgaaccgaagtttccttgaccaaaggaaa
gataagcatttccagacctcaacaaactaccctggttttgatttattgttggccaaaagt
gtgtttgaaaagctgctaactgaggatgttcttcaaactgaggtggaaaaggctgtcctg
ctgttgcttcctcgtcttgataacaaaccggtgggactggagggtttgagggtcttcctg
gttctgactgaacttcttcatgtgactcagaaacattgtcagccacagatctcgtcaaca
agcctgaagctggttgaagaaattattgctgccttccaaagactttctcccgaaagcctc
cggattataggagactggtggcattcactgttaccctctacaatggtcagacatgtaaac
gtatggaagacggccctttcatggccattttctcacaactcattcaacagtatcctgctg
atcctccagaatctgtttgaagccaacaggaagaaaatccctgaaaataaattttgtgtg
gagtttgaccgaacatttcttgaagttgagctgcagcgctggcgtggaatgtcactaaac
aggtcattatttcctcagatggtggatgatcaacccctcttactctgtgattttccattt
gtcatggatctgaaatcaaagaaaatggtttttgacaccagtgctgcttggactcaggaa
gatcatcagagggtttttgttcctccctttggagggactactcagtcaaatccttatttt
gaactccacctgagccgagcttcacttttggaggaagccttcgctcagctggccgctgct
catcaaaccgaccttaagaagccactcgtggtgcaccttgatggagactcaaaggtcaca
cgagtctatagatccgatttttttcaccacctcaacatagttcaagaaaaaagagagatg
ttcatgttgaacgagtctgaaagactagcctggttctcctccagagcagaccaggcaaac
ttccacctgcttgggattctgtgtggactggccttatacaatgacagcttcattcaatta
cccttcccactggttctgttcaaaaagctgctcgacattgagccaactctagaagatatg
atggagttcaacgcaggagttggcaggcatctgcagtacatattggactacgaagatgac
ctggaagacctgtgtatcaccttcgagattaactgggatgagcgaaatgttgaccttgat
cctagtaatccaggaaagctcgtcacaaaccaaaataagaaggagtttgtggatgcctac
gtgaattatgccttcaaccagtcagtggagggcatgtttcaggagttcaagcacggtttc
ttcctggtgtgtgaccagcagctggtgaagcttttcagaccagaagagctgcagggagtc
ttagtgggtggagacgtctataactgggcgaagctcaaacagaacacacagtatgagtgg
atcagtgacagacacccaactatgcagatgttttgggacgtttttgatgaacttactgaa
gagcagaaaaaagattttattttatttctgactgggtttcggaaagtccctgttcttggc
atggaccagatcaggatgaaaataagaataaaacaaatccagagtggctcccctgatgag
catttcccagagtcattgacatgtcactctattcttgagttgccgttgtactcgaccaaa
gagatcatgcgggaaagactgacggaggccctggaaccagacagaggattcagggcgtga
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