Poeciliopsis prolifica (blackstripe livebearer): 129364112
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Entry
129364112 CDS
T09758
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129364112 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129364112 (chrna5)
Ion channels [BR:
pprl04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129364112 (chrna5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129364112
NCBI-ProteinID:
XP_054892527
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MMLRAGEATTFHVLLLMLLPSLCWYHLCHSLLPQATNDISKKRKQPSSWMACCRRRQEAP
NLSSYAKAEDKLFKYLFQNYQKWVRPVEYLNQTISVKFGLAISQLVDVDEKNQLMTTNVW
MKQEWVDMKLRWSPEDFLGITTIRVPSDRIWLPDVVLYDNSDGRFEGTITKAVVKYNGTI
SWNPPANYKSACTIDVTFFPFDLQNCSMKFGSWTYDGSQVDVLLEDFHVDKQDYFDNGEW
EIVKATGSRGLRTDGSSSYPTITYFFIIRRLPLFYTLFLIIPCIGLSFLTILVFYLPSNG
GEKISLCTSVLVSLTVFLLVIEEIIPSSSKAIPLIGEYLVFTMIFVTLSIVITVFAINIH
HRSSSTHHGMAPWVRKIFLHRLPKLLCMRSHVDRYAAARVPESERNIGLGNIKNPTPELT
PLLYTQHNLKAALESIRYITMHVVKENQVREVVRDWKFAAQVLDRMFLWAFLLVSVLGSA
LLFIPVIHKWASIIVPTHPGSTL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttagagcaggagaggcgaccactttccatgtactgctgctgatgctgcttcca
tctctgtgctggtaccacctgtgtcactctcttctacctcaggccacaaatgacatttcc
aaaaagaggaaacagcctagctcgtggatggcatgttgtagaagaagacaggaggctcca
aatctctcctcctatgcaaaagcagaagataaactgttcaaatacctctttcaaaactac
cagaaatgggttcgtccagtggagtacctaaaccagaccatcagcgtgaagttcgggttg
gccatctcccagctggttgatgtggatgagaaaaaccagttaatgacaactaatgtttgg
atgaaacaggaatgggttgatatgaaattgcgatggagccctgaagactttttgggcatc
acaaccatccgtgttccctcagacaggatctggcttcctgatgttgtactttatgacaat
tcagatggacgttttgagggaactatcactaaggctgtcgtcaagtacaacggaaccatt
tcatggaatccaccagccaactacaagtccgcctgcaccatcgatgtcaccttcttccca
tttgacctccagaactgttcaatgaagtttggatcctggacctatgacggctcacaggtg
gatgtccttctggaagattttcatgtggataagcaggattattttgacaatggggaatgg
gagatagtgaaagcaacaggcagccgtggtctcagaactgatggcagcagttcctatccc
accatcacctatttctttattatccgtaggctgcctcttttctacactctcttcctcatc
atcccttgcatcggcttgtcctttcttaccatccttgtcttctatctgccctcaaacggt
ggtgaaaagatctctctctgcacctctgtgctggtgtcactcacagtcttcctcttggtc
attgaagagatcatcccttcgtcttccaaggcaatccctcttattggggaatacctggtc
tttaccatgatctttgtcacactctcaatcgtcatcaccgtctttgccatcaacatccac
catcgctcctcatcaacacatcatggcatggcaccgtgggtgagaaagattttcctacat
cggctacctaagctgctatgcatgcgcagccatgtggaccggtacgctgcagccagagtg
cctgaatcagaaagaaatattggattaggaaatataaaaaatccaactcctgagctcact
ccacttctctacacccagcacaacctcaaagcagctttggaatctattcgctacattacc
atgcacgtggttaaagaaaaccaggtcagagaggtggtgcgagactggaagtttgccgct
caggtcctggatcgaatgtttctgtgggccttccttctggtgtcagttcttggatctgct
ctccttttcatcccagtcattcacaaatgggccagcatcattgtcccgactcatcccggc
agtactctctag
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