Poeciliopsis prolifica (blackstripe livebearer): 129364122
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Entry
129364122 CDS
T09758
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprl03009
]
129364122 (ddx21)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129364122 (ddx21)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129364122 (ddx21)
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
Pre-60S particles
Helicases
129364122 (ddx21)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129364122 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129364122
NCBI-ProteinID:
XP_054892542
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MPSKIIFETEEETTEKDMDTVAEAETFKVKNKTKEGKKLKKKKQQQSEEQVEEPDCDPPA
PKKKKKKDKLAAAQANGHIDEAADLNGDSGDTESPKKIKKKKKETSEKNQKQKKATTEAA
TNGHSTPNTPVQTPSQTPSQSSDELASDSENEQTPEQREGAFSNFRISKVTIDKLKARGV
TYLFDIQVKSFNPVYDGEDVIAQARTGTGKTFSFAIPLIEKLQNDSVEMTRGRPPKVLVL
APTRELAIQVSKDFKDIAKRLSIACFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHLENN
KLNLSKLKHVVLDEVDQMLDMGFAEQVEEILGTSYKKDSDTNPQTLLFSATCPPWVYDVA
KKYMRPGCKHIDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVVKVYSGSHGRTIVFCE
TKKEANELAMNASIKQSSQSLHGDIPQKQRETTLKGFRNGVFEVLVATNVAARGLDIPEV
DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP
TANDIIKSSSKDAARFLDSVPATAVEYFRESAEKLIKEKGAVDALAAALAHISGATSLEQ
RSLLSSDAGYTTMQLLCSQEMHNLGYAWRTIKEQLGEGFENHIHRMTFLKGKTGVCFDVP
ADKVKEIQDNWKDGRRWQLTVATELPELEEKQFTIRGDRGGFRGGRGRGFGGNGGRNGGF
RSGGGGGGGGRGYGNRGGHKRTFNQAFDY
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaaatcatctttgaaactgaagaagaaaccaccgagaaagatatggacacc
gtcgcggaagctgaaaccttcaaggtgaagaacaagacaaaggaaggtaagaagctgaag
aagaagaaacagcagcagtctgaggagcaggtggaggaaccagactgtgatcctccagca
ccaaagaagaaaaagaaaaaggacaagctggcagcggcccaagcgaacggccacatcgat
gaggccgctgacctaaatggtgacagcggggatacagagtcaccaaaaaaaataaaaaag
aagaaaaaggaaacatcagagaagaaccagaagcaaaagaaagcaaccactgaggcagca
actaatggacattccactccaaacacaccagttcaaactcccagtcagaccccatcccag
tcaagcgatgagttggccagtgacagtgaaaatgaacaaacacctgagcagagagaagga
gctttctccaacttcagaatctccaaagtcaccattgataaactgaaagctcggggagtc
acctacttgtttgacattcaagtgaagtcatttaaccctgtatatgatggagaggatgta
attgcccaagcccgtaccggaacaggaaagaccttctcctttgccatcccgttgatcgaa
aagctccagaacgattcagtggagatgacgagaggccggcctcccaaggtgctagtcttg
gctcctaccagagaattggctatccaggtctccaaggacttcaaagacattgccaaaaga
ctgtccattgcctgtttctatggaggcagctcatataacccacagattgatgctattcgt
aacgggattgatattttggtgggaacgcccggtcgcattaaagatcaccttgagaacaac
aaactcaacctctccaaactgaaacacgtcgttctggacgaagtggaccaaatgctggac
atgggatttgcagaacaagttgaagagattttgggtacttcgtataagaaagacagtgac
accaacccacagactcttctgttttctgcaacctgccctccttgggtgtatgatgtggcc
aagaaatacatgaggccaggctgcaagcatatcgacttgatcggcaagaaaacacaaaaa
gcggcaacaactgttgagcacctggccatcgcgtgccactggtcccagcgtgctgcagtg
attggagatgtagtcaaggtgtacagtggcagccatggaagaacaatcgtcttctgcgaa
actaagaaggaagccaatgaattggccatgaatgcttctatcaaacagagttcccagtcc
ctccatggggatattccacagaaacagagagagacgactctgaaaggtttcaggaatggc
gtctttgaggttcttgttgccacaaacgttgccgcccgtggattagacatcccagaggtc
gacttggtggtccagtgttctccaccaaaggatgtggagtcctacatccatcgttcagga
cgaacaggacgggcgggcaggactggcgtctgcatctgcttctaccagaggaaggaagag
gaccagttacgctacgtagagaacaaagccggaatcactttcaggcgagtcggtgttcca
accgccaatgacatcatcaaatcatccagcaaagacgctgccaggtttctggactctgtt
ccagccacagctgttgaatatttcagggaatcagcggagaagctgatcaaagagaaggga
gcggtggatgcactcgctgctgctctggctcacatttctggagccacgagtctagagcag
agatctctgctcagctctgacgctggttacaccacgatgcagttgctgtgctcccaggag
atgcataatctaggttatgcctggagaaccattaaagagcagctgggagagggctttgaa
aaccacattcacagaatgaccttcctcaaaggcaaaacgggagtttgttttgatgtccca
gctgataaagtcaaagagattcaggataattggaaagacggtcgccgctggcagctgaca
gtagccacagagctccctgagctggaggagaagcagttcaccatccgtggcgacagaggc
gggtttagaggcgggagagggcgtggctttggtggaaacggaggacgtaatggcggcttc
cggagcggcggtggtggtggtggtggcggcagaggctacggcaaccgaggaggacacaaa
cggaccttcaaccaagcgttcgattactga
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integrated database retrieval system
