Poeciliopsis prolifica (blackstripe livebearer): 129364123
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Entry
129364123 CDS
T09758
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129364123
Membrane trafficking [BR:
pprl04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129364123
BRITE hierarchy
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
129364123
NCBI-ProteinID:
XP_054892543
LinkDB
All DBs
Position
Unknown
AA seq
1960 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSLGEEVP
PGFTCIETTPSGHSADLNNGGLMAPQIFLCYRRGRDKPPLIDLGVLYEWKERLKQGCHLI
QTTPAGRPANISGNSSQRIYVTYRRAPDSQPHASLAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNVITYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ESWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDTQLSQLGLLSPEQSN
ASPSSPAADAAINPGNSAGSASSVHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLHNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNDDKRALTWKILPKKACKNLMNVLSNL
HQQLVDGQYHSDGLLEFTMSDSQELSCGKSLHMLELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDTSLAF
FDDCVDKLYNSERSAEKGGKVDGERPDETRLIEIDESQRSEHTVFITPPELPPLPDGEEY
PLCYRYDGFPVLTLELFDPVEGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKK
YSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVILGVAQFKRALRRHGPLTQSPLSGGSDLDAMSHGSLDSSADPNPAEQSPVEPADD
RSSTVGGGGVSAGARPVTARSPWVGAELREATLHPGDQSDLGYNSLSKEEVRRGDAAPPD
KDEKKESDCSSLSETESAKGSKDCLPQLDLEIGSSFKPRGIVRSSYPYGDSARKPRSSTS
AGHIAGLLFTTSLDEIGEVHASSLLRRHRSALEEVVGSAALDWQAARARRVSGDTPGSGG
SGATVLGLGMSQAETDPDKIAGLLGADVKILSGTNYSQRRHLGGFNYKEEEEEQSYSDED
KSNTEAIFDFEDLDLEKPSQGVRHLKKPDERSASYGGMSSAGPRGAVTRTGIAAGFDPLS
LMAAESQSATYPDGDEAGAQGARRNLAREIELYMSHLDTPLSSRTSSSELQGPASPLLLQ
PHAAAAFRRSSLPHAAPLRTSAMPRSRTFHQASPARPASRQRLMSSPSGRSSSTSPSLSP
FRERLASPSSSAFALDALLTPTLDVFKTSVVSAGKGVAERASRWYSRFATSNTPTKDGFS
DRLSVSSLSVGDPDGSIQDEAEYEESEPLGVSPQKNGPSCPRRSPVHSRVDSPTAGRSLG
RPTSLPPGCPLSLPGFSLPDKSDLGSSRCTSNTSIFNNFAMELLISSCSRCKTCDCLVYD
EEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDLRGPGRLFLKGSPSMDDAMTSSYSA
STGLDTGTSTLSTPCPTTAVFPPSPTAAAKETPGRTRPSRAQGINIPTERRQGALSSGGP
ITRSVSAFGPMEEESQLSHLLPTSGSLPSHLNEAADPLSMDWQLHNPEPVTVPYLSPLVL
WKELESLLENEGDPVIAEADMVDHHPIIYWNLLWYFRRLDLPSNLPGLILTSEHCNRDSQ
VPRHWMSEDSKHVLIQILWDNLKLHQDPVQPLYILWNTYNVGYPPTRPVPDDEKPLTDEL
LQAVVRSIQRNDVGRPMAQLLQLLDRMLGVKRQRSLYRDILFLSLVALGKDNIDIDAFDR
EYKLAYDRLLPPLVRLTHNCDRPPGAGVMECRRTFGEPYL
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggcccccgtgtagccgactacttcgtggttgccggtctgacggac
ccgtccaagccgttggaccaggagatccactttgatgacgtgtgccacaagacggccaag
cccaaagcgcccatcacagacgtggcggtggtgatccgctccctgggcgaggaggttcct
ccggggttcacgtgtatcgagactacgccgagcggacactcggccgatctgaacaacggc
ggcctcatggcgccgcagatcttcctgtgctacaggcgaggccgcgacaaaccgccgctc
atcgacctgggagtcctgtatgagtggaaggagaggttgaagcagggctgccacctcatc
cagaccacgcccgctggtcgtcccgccaacatcagcggcaactcctcccagcgaatctac
gtcacgtaccgccgagcgccagacagccagccgcacgcctccctggccgtcaccgacatc
tgcatcatcatcccgagcaaaggcgagacgccgccgcacaccttctgcaaggtggagaag
aatctcaacagcagcatgtggggctcctctgtttacctatgttacaagaaatctgtggcc
aaaaccaacgtgatcacctacaaagcaggtttattcagcagatatccagaggaggactac
gagtctttccctctgccggagtcggtccctctcttctgccttcccatgggggcaacaatc
gagagctggccagcgaacaccaagtactccctccctgttttctccaccttcgtcctcacc
ggcgcgtctggagagaaggtttacggtgctgccatccagttttatgagccctacccacag
gagtgcctgactgatacgcagctctcccagttgggcctcctgagcccagaacaaagcaac
gcctctccatccagccctgcagcggacgccgccatcaatcctgggaacagcgccggcagc
gccagctcagtccacaccaacaagtgcatctgcctgctgtcccactggcccttcttcgac
gctttccgcaagttcctcacattcctctatcgatactccatctccgggccgcacgcgctg
cccattgagaaacatatctctcacttcatgcacaaagttcccttcccttcctcccaaagg
cctcgcatcctggtgcagctttctcctcacgacagcctgatgttgagccagccagtgagt
tctcccttaccgctcagcggaggaaggttttccactctgctccataacctcggtccggag
aacgccgtcaccctgctggtgttcgccgtcaccgaacataaaatcctggtccattctcta
cggccggcggtgctgaccagcgtcacagaggcgctggtgtcaatgatcttccccttccac
tggccgtgtccctacatcccgctctgccccctggcgctggccgacgtgttgagcgctccc
tgtccgttcatcgtcggcgtcgactcccggtactttgacctctacgaccctccgcctgac
gtgagctgcgtggacctggacacaaacaccatcttccacaacgacgataaacgcgctctc
acttggaagatcctgccaaagaaagcgtgtaaaaacctgatgaatgtgctgagtaatctc
caccagcagctggttgatggtcagtaccactctgacgggctgctggagttcaccatgagc
gactcacaagagctgagctgtgggaagagcctccacatgctggagctggagatccaggaa
gccttcctgcgcttcatggcggccattttaaagggttaccgctccttcctgcgccccatc
acacaggcgccgtcggagaaggccacggacgccagctcgctttttgacttacaaggattc
ttgaagagccgcgatcgctctcaccagaagttttactcgctcatgaccaagacccaaatg
ttcatccgcttcatcgaggaatgctcgttcgtcagcgacaaagacaccagcctggcgttc
tttgacgactgcgttgacaaactttacaactcagagcggagcgcagagaaaggagggaag
gtggacggcgagcggccggacgagacgcggctgatcgagatcgacgagtcgcagcgcagc
gagcacacggtgttcatcactcctccagagctgccgccgctgcctgacggggaggaatac
ccgctctgctacaggtatgacggtttcccggtgttgactctggagctgttcgacccggtg
gagggactgcggacgccctcctcccgcctcgctgccaggcacagctgccccacaagcccc
gcccccatgttcagacgcaccaaacaggagatcaaatcagcgcagaagatcgccaagaag
tattcgtccatcccacagctgtggtccaagtgcctgctgcgtcactgctacggcctgtgg
ttcatctgcctgccggcgtacgtcaaggtgtgccactccaaggtgcgggcgctccgcacc
gcctacgacgtcctcaggaagatgcaggcgaagaagctgcagccgcccgacgaggtgtgc
taccgggtcctgatgcagctgtgtgggcagtacggtcagccggtcctggcggtcagagtc
ctgtttgagatgaagaaggccggcgttcaccccaacgccatcacctacggatactacaac
aaggcagtgctggagagcacgtggccctccagcaccagaggaggatacttcctgtggatg
aagctgaggaacgtcattctgggcgtggctcagttcaaacgagctctgcgccgacacgga
ccgctcacccagagcccgctgtcaggtggcagtgacctggatgctatgagtcacggcagt
ctggacagctctgccgacccaaacccggccgagcagagcccagtagaacctgctgacgat
agatctagcacagtgggcggcgggggcgtcagcgcgggggccaggcctgtgacggcccgc
tctccctgggtgggcgctgagctcagagaagccactctccacccaggagatcagtcggat
ttgggctacaactctctgtcgaaggaggaagttcgacgaggcgacgcggctccccccgac
aaagacgagaagaaggagagcgactgcagctccttgtcggagactgagagcgcaaagggc
agcaaggactgcctgcctcagctggacctggagatcggctcctccttcaagcctcgagga
atcgttcggagcagctatccgtacggggattctgcccggaaacccaggagctccaccagc
gcaggccacatcgctggcctcctcttcaccacgtctctggatgagatcggcgaggttcac
gccagcagcctgctgcggcgccaccgcagcgccctggaggaggtggtgggcagcgccgct
ctggactggcaggcggcgcgggcccgccgcgtgagcggtgacacgccgggcagcggcggc
agcggcgccaccgtcctcggcctcggcatgagtcaggcggagaccgaccctgataagatc
gccggactgctgggcgccgatgtcaagatcctgtccggtaccaactacagccagaggcgt
cacttaggaggctttaattacaaagaggaggaggaggagcaaagctacagtgatgaagat
aagagtaacacggaagccatttttgattttgaggatctggacttggagaagccgtctcag
ggggtcagacatctgaaaaagcccgatgagcgcagcgccagctacggcggcatgagctcg
gcggggcccagaggagccgtgactcggaccggcatcgcagcgggcttcgacccgctctcc
ctgatggccgcagagtcgcagagcgccacgtacccggatggcgacgaggccggagcgcag
ggcgcccgccgtaacctggcccgggagatcgagctgtacatgagccacctggacaccccg
ctgagcagccgcacgtccagctccgagctgcagggcccggccagcccgctgctgctccaa
ccccacgccgccgccgcgttccggaggtccagcttgccccacgctgctccactcaggacc
agcgcaatgccgcgctcacgcacctttcaccaggcgtcgccggcccggcccgcgtcccgc
cagcggttgatgtcgtcgccgtcgggccgcagctccagcaccagccccagcctcagcccc
ttcagggagcgcctcgcctcgccgtcctcctccgccttcgccctggacgccctgctcacc
ccgacactcgacgtcttcaagaccagcgtggtttctgctgggaagggcgtggcggagcgg
gccagccgctggtactcgcgtttcgccacgtccaacacgccaaccaaggatggcttcagc
gaccgtctgagcgtttcctccctcagtgtcggagatccagacggctccatccaggacgaa
gcggagtacgaggagtcggagccgctcggcgtctcccctcagaagaacggtccctcctgt
ccccgcaggagtcccgtccacagccgggtggacagtcccactgcaggacgcagcctgggc
agacccacgtctcttcctcctggttgtcctctgtctctgcccgggttctctctgccggac
aagtccgacctcggatcgtcgcgctgcaccagcaacaccagcatcttcaacaacttcgct
atggagctgctgatctccagctgctctcgctgtaaaacctgcgactgcctggtttacgac
gaggagatcatggctggatggacggccgacgactccaacctcaacaccacctgccccttc
tgcggaaaccccttcctgccgttcctcaacgtggagatccgggacctgagaggacccggg
aggctcttcctgaagggcagcccgtccatggatgacgccatgacctcatcgtactccgcc
tccacgggtctggacacggggacgtccacgctgtccacgccgtgtcccaccacagccgtg
ttccctccctcacccacagcagccgcgaaggaaactcctgggaggactcggcccagcagg
gctcaaggcatcaacatccccacagagcgccgccagggggcgctgtcctccggcggaccc
ataacccgcagcgtcagcgccttcggccccatggaggaagagtctcagctcagccacctc
ctgccgacgtccggcagcctgccgagccatctgaacgaagccgcggacccgctcagcatg
gactggcagctccacaacccggagcccgtcacggtgccgtacctgagcccgctggttctg
tggaaggagctggagagtctgctggagaacgagggcgacccggtgatcgccgaggccgac
atggtggaccaccaccccatcatctactggaacctgctctggtacttccggcggctggac
ctgcccagcaacctgccgggcctcatcctcacctctgagcactgcaacagagactcccag
gtccctcgtcactggatgtccgaggacagtaaacatgttctgatccagatcctgtgggac
aacctgaagctgcaccaggacccggtccagcctctgtacatcctctggaacacatacaac
gtgggctaccctccgacccggccggtcccggatgacgagaagcctctgaccgacgagctg
ctgcaggccgtggtgcgcagcatccagaggaacgacgtcggccggccgatggcgcagctg
ctgcagctgctggaccggatgctgggggtcaaacgccaaaggagtttgtacagagacatc
ctctttctgtccctggtggcgctgggaaaagataacatcgatatcgacgccttcgatcgt
gagtacaagctggcgtacgaccgcctgctgcccccgctggtcaggctgacccataactgt
gaccgtcctccgggcgccggcgtcatggagtgccgccggacgttcggagagccttacctg
tga
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