Poeciliopsis prolifica (blackstripe livebearer): 129364308
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Entry
129364308 CDS
T09758
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04137
Mitophagy - animal
pprl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129364308
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129364308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129364308
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
129364308
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129364308
Multi subunit type E3
ERAD complex
129364308
LMBR1L-GP78-UBAC2 complex
129364308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
SVIP
zf-RING_Vps41
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
129364308
NCBI-ProteinID:
XP_054892848
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLVGSIFSAYTTVTDPGFGALETDDTPAPSDVDLEHL
SSAVGNTELARTVLWYLITDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDTMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDGALGGNQQQGPGLEDNIGPVGAAPETRPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGMAQANNSQLMAMAHQIQEMFPQVPSYLVIQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERGPLQGNQAEDEQPGPSGEAEQSTSESDNM
EARGGRFSKSAEERQKMLKLRKEEMLQQARRRFLNKGQEDYEEDLPRLEEDSLTQPDSTV
LRRRTMAEAAERRMQHQEEPAP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagaggtttccctggcccagcttgcagacctacactgcactg
agtgtggctttgctggttggcagcatcttcagtgcctatactactgtcactgacccaggg
tttggggccttggaaactgatgacacgccagctccctctgatgttgatcttgaacatctg
agcagtgcggtcggaaacacagaactggccagaactgtgttgtggtatttaattacagac
agtctgtttgtatgggtgctggtgaacacattttgctgctctttgatgttaattgcaaaa
atgattcagtatgtggtttttgggcccctcagagtcagtgagaagcagcatctgaaggat
aaattctggaactttatcttctacaagttcattttcatatttggagtgttgaatgtgcaa
accgtagaagaagtggtcatgtggtgtttgtggttctcagccttggtctttctccatctc
atggttcagctctgcaaagatcgctttgaatatctttctttctccccgtcaaccccgatg
aacagccatgtgagagtgctgtgcctgctggtttccctgctcctggactgctgtggcctg
gctgtggtctgtggcctgctaggagcctcccatggcatgcacacactctcctttatggct
gcagagtgtttgttggtgacggttcgcactggacatgtcattatgaggtactccatccat
ctgtgggatctcaaccatccaggaacctgggagagcaaaggcacctacgtctactacaca
gacttcatcatggagctggctatgctctttctggatctgatgcatcatatccatatgctg
ctgtttggtaacatctggctgtccatggcgagcttggttatctttatgcagttgcgatat
ctgttccatgaggtccagcggcgcattcgcagacacaagaactaccttcgagtcatcaac
aacatggaggccaggtttgcagttgctactgcagaggaactggctgcaaatgatgacgat
tgtgccatctgctgggacaccatgctaacagcacggaaactgccctgtggccatcttttc
cacaactcttgcttgcgttcgtggcttgagcaagacacgtcatgtcccacatgtcgaaca
tctctgaacattaacggggacggagctctgggtggaaaccagcagcagggtcctgggctg
gaagacaacattggcccagtaggtgctgctccagaaactcggccacacatcaaccaacac
aatcacttcttccactttgatggatctcgcattgccagctggctgcccagtttttctgtt
gaagtaatgcatactactaatatcttgggcatggctcaggctaacaactcccagcttatg
gccatggcccatcagattcaggagatgttccctcaggtgccctcctacctggtcattcag
gacctgcagctgacccgttctgttgaggtcacaacagacaacattttggaaggacgaatc
caggtgcctttccctacacaggccatagagcgtggtccgctccaggggaaccaagcagaa
gatgagcagccaggtcccagcggagaagcagagcagagcacaagtgagtcagataacatg
gaggccagaggaggtcgcttctccaagtctgccgaggagaggcagaagatgctaaagctg
agaaaagaagaaatgctccagcaagcgcgcaggaggtttctaaacaagggtcaagaagat
tatgaggaggacttgcccagactagaagaggactctctcacacaaccggactccactgtg
ctgaggcgtagaaccatggcagaagctgcagaaagacgcatgcaacaccaagaggaacct
gcaccctga
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