Poeciliopsis prolifica (blackstripe livebearer): 129364439
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Entry
129364439 CDS
T09758
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129364439 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129364439 (cstf3)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129364439 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
Motif
Other DBs
NCBI-GeneID:
129364439
NCBI-ProteinID:
XP_054893051
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSTEGTAEQTAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTHERLVS
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFAFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRAIFKKAREDLRTRHHVYVSAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAALLPEAVVAPSVPTLKDDPDRKPEYPKPDTNQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPESVDAAVELIT
GRQPEAAGEGNGPMENHATAKSLKRPNADSDEEDDKGAIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggagggaacagccgagcagacagcagctgagtatattcctgagaaggtgaag
aaagcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaatcaacccatagataaagcaaggaagacccatgagcgacttgtctca
cagttcccgagttctggcagattctggaaactgttcattgaagctgagataaaggctaaa
aactatgacaaggtagagaagttgtttcagagatgcctaatgaaagtgttacacattgac
ctgtggaaatgctaccttgcatatgttcgagagaccaaagggaagcttcccagctacaaa
gagaagatggcccaggcgtatgatttcgcccttgataaaattggaatggaaattatgtcc
taccagatttgggtcgactacataaatttcctgaaaggagttgaggcagtgggctcatac
gcagaaaatcagagaatcactgcagttcggagagtctaccaaagaggttgcgtgaaccca
atgataaacattgaacagctctggagagattatagcaaatatgaagagggtatcaatgtg
catttggctaaaaagatgattgaagatcgcagcagggattacatgaacgcaaggagagtg
gcaaaggagtatgagacagtaatgaaagggcttgacagaaacgcaccttcagtcccacca
cagaactcccctcaggaggcccagcaagtggaaatgtggaaaaagtacattcagtgggaa
aaaagcaacccactccgtacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggttctgggccaccatcccgacatttggtatgaggccgctcag
tacctggagcagtccagcaagctgctggcagagaaaggagacatgaataattcaaagctg
ttcagcgatgaggcagctaacatctatgaacgtgccattgggactctcctcaaaaagaac
atgctcctctactttgcgtttgctgattacgaagaaagtcgcatgaagtacgagaaggtg
cacagcatctacaacaaactgctcgcgatcgaggacatcgaccccacgctggtctacatc
cagtacatgaagttcgccaggagggcggagggcatcaaatcaggtcgcgccatcttcaaa
aaggctcgagaggacctacgcacgcgtcaccacgtctacgtgtctgcagctctgatggaa
tactactgcagcaaagataaatcagtggcctttaagatttttgagctgggtttgaaaaag
tatggagacattccagagtacatacttgcctacattgattacctctcccaccttaatgag
gataacaacactagggttttgttcgaacgggtcctcacctctggaagcctgtccccagag
aaatcaggtgagatctgggctcggttcttggcgttcgagagcaacatcggagacctggcc
agtattcttaaagtagagcgccgacgtttcacagccttcaaagacgagtatgaggggaag
gaaacggctttgcttgtagatagatacaagttcatggacctttatccctgctctaccagt
gaactcaaagcccttggttacaaggatgtgtctcgtgccaaactggcagcactgctccct
gaagctgtggtggctccctctgtgcctacactaaaggacgatcctgatcgtaaaccagag
tatcccaaaccagacaccaatcagatgatcccgtatcagccacgtcacctcgctcctcca
ggtctacacccggtccctggtggagttttcccagtccctccagctgctgttgtcctaatg
aagctgctccctccgcctacgtgcttcactggtccctttgttcaagtggatgagctcatg
gaaacttttaggagatgtactcttcctgagagtgttgatgctgctgtggagctcatcacc
ggcagacagcctgaggcggcaggggagggcaacggccccatggagaaccacgctaccgcc
aagtccctcaagaggccaaacgccgactccgacgaggaggacgacaagggagccatagcg
ccacccattcacgacatctaccgcgcgcgccagcagaagaggattcgataa
DBGET
integrated database retrieval system
