Poeciliopsis prolifica (blackstripe livebearer): 129364475
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Entry
129364475 CDS
T09758
Symbol
chd9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129364475 (chd9)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129364475 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
129364475
NCBI-ProteinID:
XP_054893106
LinkDB
All DBs
Position
Unknown
AA seq
3002 aa
AA seq
DB search
MDFFDDPNLFVGGLDGLDDDGFHSAPSLVDELNLSAGFEPLQVEALGPGKHQEMMPPVSS
QQPVPSYTQPMVHYTGVKAENPLGQVFSGSRSTSCDVGPEQHGQYHRATISQVPQPNGLF
CSTGSPMWGNQDQNGNMFHHVSQQQHQQQQQLCHQQLHNQQLHGRQHTQQQHRSGHQAEQ
QQRMRQQQLQRQHSHQQQLLNQHQQITTASVCLQQQQHPTFSFLQGGQSNSQQQIHHSPH
QLPVRESQFHSRSLPGKPFLERQNASLSGACLQTRQQQGSYQLVRGGPAFSVSGLEDSHL
SFPIHPSSAVHSLPACSVSSAHAYQAAEFPAYPGEPEIPSLTQQSSCRPITTTPITTTVP
RLPGTACQFQSTAHVSQLHSGTTVSQADECPFRALRCSGETQAVCKSSELFGESVNCYPS
MTNHLPSEQQINCEVINTNGYQAFGDNIMPSEAQDGDLEALDPPDLLPDLLPQLEDALRQ
QDESSCSWFDSSQKKGHENRKPTAIECKEEKPRKNPNGPSSQVRVLSPPVKSSSSSSSSS
SSSSSSSSSSSSEKRVPRRTHHQMESNLHEKQEKANRIISEAIAKARQRGEKNIPRVMSP
ESFPSSSSQYKSHREREHKGNGKARTKEKASRKACIVPSSKPKQKTKIGKIVIKIGKRKK
RKPESSEEESDDDPPPRHSSKDDDSKRRSNRQVKKKKYAEELEARLSDEDVKVIVKAKKS
NTAASKDPAVQLFVENPTEEDAAIVDKIMSSRIMKKEVSPGVMVEVEEFFVKYKNYSYLH
CEWATEQQLEKDKRIQQKIKRFKMKQAQRALFFTDMDEEPFNPDYVEVDRVLEVSYCEDK
DTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFERLQAVKPDSRRVERPPANLWKK
REQSREYRNGNTLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIHRISI
KGPFLIIAPLSTIANWEREFHTWTHLNVIVYHGSMISRQMLQQYEMYFRDAQGRVIRGAY
KFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGT
PLQNTVEELFSLLHFLEPARFPSENNFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVE
KKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQSNMPNLVNTMMELRKCCNHP
YLIKGAEEKILEDFREVHNPTAADFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQM
VRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDXFSKPDSDRFVFLLCTRAGGLGINL
TAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLD
KAVLQSMSGRDNSLGGGTGGGTAQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDID
QILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMDMVNGR
NSLVIDTPRVRKQTRPFSATKDELAELSEGESDSDETKPKLRRNERLNNYGRTECFRVEK
NLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLAYCLVHYRGDDKIKSFMWDLIAPT
EDGRTKELQNHLGLSAPVPRGRKGKKMKTQTSSFDIHKAEWLRKHNPEHMLQDDGYKKHL
KHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGGDSSEVKIWVPDPDHSELPALWWDAVAD
KCLLLGVFKHGYEKYNTIRADPTLCFLDRVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPA
PALLKDDMEDDASSPGDLVVSDNAGDAPPVTEGQTSYWPSPSVLTARLRRLITASQRYTK
SRQILHIHQTQSQSQPQQAMMLSAPICPLPPTLKDTLNPKMAAKIERQQRWTRREEADFY
RVVSTFGVVFDPNLAQFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLPPKDGDS
AVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHPLLFERLSLCLVSSDLPVWWEAGT
HDRDLLIGAAKHGVSRTDYHILRDPDLCFMAAQRNYSQMKAAQQQQQRTTTPLLLPQYQA
AGPLPTGSPLPLPTQRDPDPCGIVPKVEAASEEEETKERQGESWSPPQPPATPTGLEEKP
VSVVKDSERQMVAARTKPLTPNSTERKPKKASKRGRREARRGSESDSDGSSSSSSSRSSS
SSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEEAKKKVPVTTSVKG
FDEDSVASLSTTQDEMQDSHVSENGVTNNSSHPFQGGGYMLAASYWPKDRVIINRLDSIC
QAVLKGKWPGHRRVYEPGSTVASFYTTKLLDNANSLCEDPSASPQGSKVTKHVAENKEFS
VKLNDQEGGLKLTFQKQGLPIKRPLESEEGPQAQQQYLARLHELQSASDTGLADMTKPQS
SFQTVTPGVSGQMRLNGVMDGQPVVKKRRGRRKNVEGMELLFMNRNKLSATPDSVAPGWG
GIGQVGITGAAAQMNSSQIPADTDTRIPVINLKDGTRLAGDDAPMRKDLDQWLREHPGFV
ADTGAFIPEVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKIG
GAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRR
PKNPLAKAAVAAAAPSSAPSALGLNSLLANGLLSGMDLGSLQAFQQNLQSLQSLQLTAGL
MGLPPDASNLAASNLAAMFPMMLSGMAGLPNLLGMSGMVGKPTQDTAGGSEEKTKGTDSS
GTCEPPNTPSNTSETKGERTEDVNTTPSSTSSSASSATVTPSASAASAATSHPLSLNPLL
LSSMLYPGMLLTPGLNLPVSATQPQSSNSDPSTLASAAAPLLSAPAASQSSLTEMEQPSG
KEEEEEEEAPEEALDDEEEDDEESAEPRENSGPEGSAKAESSSSESGSSSSSSDDSDSSD
ED
NT seq
9009 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttgatgatcccaacctctttgtcgggggtttggatgggctggatgacgat
ggtttccattcagcaccatcgcttgtggatgagctcaatctcagtgctggttttgaaccc
cttcaagtggaggcacttggcccagggaagcatcaagaaatgatgccaccagtctcttcc
caacaacctgtgcccagttacacccagccaatggttcattatactggggttaaggcagag
aatcccctggggcaggtattttctggttctcgaagcacaagttgtgatgtgggtcctgag
caacatggccagtaccacagagccaccattagccaagtacctcaacccaacgggctgttc
tgcagtactggaagcccaatgtggggcaaccaagaccaaaatgggaacatgtttcaccat
gtatctcaacagcagcatcagcagcaacaacaactttgtcatcagcaactgcacaaccag
caacttcatggcagacaacatactcagcagcagcaccgttctggtcatcaagctgagcag
caacagagaatgcgacaacaacagctccaacgacagcacagtcatcagcaacagctgcta
aaccagcatcaacagattaccacagcgagtgtttgcctgcagcaacagcagcatcccaca
ttctcctttctccagggaggtcagtccaacagccagcagcagatacaccattctccacat
caactacctgtaagagaatcccagtttcattccaggagtcttccaggtaagccttttttg
gaacgtcagaatgcctctttaagtggagcctgcttgcaaacacgtcagcagcaggggagc
taccagttggtcaggggaggtccggccttctccgtatctggactcgaggactctcacctt
tcattccccatacatccatcatctgcagtacactccttgcctgcatgctctgtcagttca
gctcatgcttaccaagcggcggagttccctgcctaccctggagagccagaaatacccagt
ctcactcagcagtcttcatgtaggcccatcactactacaccaattactactacagtgcct
aggctgcctgggacagcatgccagttccagtccacagcacacgtgagtcagctgcactct
ggaacaacggttagccaggcagacgagtgtcccttcagagccttacgctgttctggagaa
acccaggcagtctgcaaatcatcagagctgttcggcgagtcagtaaattgctatccaagc
atgacaaaccacctgccctctgagcagcagatcaactgcgaagttattaacactaatggg
taccaagcttttggagacaatattatgccatcagaggcccaggatggagacttggaagcc
ctggatcctcctgacctcctgcctgatctgctcccccagctggaggacgctctgaggcag
caggacgaatccagctgttcttggtttgattccagtcagaagaaagggcacgaaaacagg
aaaccaactgctatcgaatgcaaagaggaaaagcctcgaaaaaaccccaatggtcctagc
agccaggtgcgggtcctcagtccccctgtgaagagcagctcttcctcctcctcttcctct
tcttcttcgtcttcatcctcatccagctcctcatcggagaagagggtgccacggaggaca
caccatcagatggagtcaaatctgcatgagaagcaggagaaggccaataggataatatca
gaagctattgccaaggcccgacagcgaggagagaagaacatcccacgagttatgagtccg
gagagcttccccagctcttcttctcagtacaagagccaccgggagcgcgagcacaaggga
aacgggaaggcccggaccaaagagaaagcctccaggaaggcttgcattgtaccctcctca
aagcccaagcaaaagaccaagatcgggaaaattgttatcaagattggaaaaagaaaaaag
cgaaagccagagtcgtcagaggaggagtcggatgatgatcccccgcctcgtcactcttct
aaggatgatgattctaagaggcggtcgaaccgtcaggtgaagaaaaagaagtatgctgaa
gagctggaggccagattgtcagatgaggatgtcaaagttattgtgaaagccaagaaaagc
aacactgctgcatccaaggaccctgctgtgcagctgtttgttgagaatcccacagaggaa
gatgctgctattgttgacaaaatcatgtcttctcgtatcatgaagaaggaggtatctcca
ggggtaatggtagaagtggaagagttttttgtaaaatacaagaactactcctacctccac
tgtgaatgggcaactgagcagcagctcgaaaaggacaagaggattcagcagaagatcaaa
cgcttcaaaatgaaacaagcacagagggcgctcttcttcacagatatggatgaagaacct
ttcaacccagactatgtggaagtcgacagagtgctcgaagtgtcgtactgtgaggacaaa
gacacaggagaggaagtggtgtactacctggtgaagtggtgttctctgccttatgaggac
agcacgtgggagctgaaggatgacgtcgatcagagcaagattgaagagtttgagcggctg
caggcagtcaagccagactcacgcagagtggagcggcctccagccaacctttggaagaag
agggagcagtcgagggagtacaggaatggcaacactctcagggattatcaactggagggg
gtcaattggcttcttttcaactggtataacaggcgcaactgcatcttggctgacgagatg
ggcctgggaaagactatccagtcaatcacattcctggaagagatccatcgtatcagcatc
aaagggccctttctcatcatcgcccccctctctactattgcaaactgggagcgagagttt
catacctggactcaccttaatgtcattgtttaccacggcagcatgatcagcaggcagatg
ctgcagcagtacgagatgtatttcagagatgcacagggtcgcgtgattcggggtgcctac
aagttccaagctgtgatcaccacattcgagatgatcctgggcggctgtcccgagctcaat
gccatcgagtggcgctgtgtgatcatcgacgaggcccatcgtcttaagaacaagaactgc
aagctgctggagggcttcaaactcatgaacctggagcacaaggtcctactgacgggtacg
cctctgcaaaacacagtggaggagctttttagtctcctccacttcctggagccggcacgc
ttcccctctgagaacaacttcatgcaggagtttggtgatctcaagacagaggagcaggtg
caaaagcttcagggcatcctgaagcccatgatgctgcgtcgtttgaaagaagacgtggag
aagaagctggctcccaaagaggaaaccatcattgaggtggagctcaccaacatccagaaa
aagtactatcgcgccatcctggagaagaatttctccttcctggctaaaggagctggccag
tcaaatatgcccaacctggttaacaccatgatggaattaagaaagtgttgtaaccacccc
tacctcataaaaggggctgaagagaagatcctggaggacttcagggaagtacacaatccc
actgccgctgactttcacctgcaggcgatggtgcagtctgctggaaagttggtccttatt
gacaaacttctgcccaaaatgaaagcaggaggacataaggtgctcatcttctcccaaatg
gtgcgctgtctggatatcttggaagactacctcattcagaaaaggtacttgtatgagcgc
atcgatggacgcgttcgtggaaacctgcgacaggctgccattgacngcttcagtaagccc
gactcggaccgctttgttttccttctgtgtacgagagctggaggcctaggcatcaacctc
accgcagcagatacctgcatcatctttgactctgactggaaccctcaaaacgacctgcag
gctcaggctcgctgtcatcgaatcggtcagaacaaggcggtgaaagtgtaccgtcttatc
accaggaactcgtatgagcgagaaatgttcgaccgcgccagcctgaagctgggactggac
aaagcagtgctgcagagcatgagtggccgtgacaacagtcttggaggaggcacaggagga
gggactgcacagcagcaattgtccaagaaagagattgaggatctgttgcgacgtggcgct
tatggagccatcatggatgaggaagacgaaggggccaaattctgtgaggaggatattgac
cagatcctccagcgtaggacgaagaccatcacaattgagtctgagggacgaggatccact
tttgccaaggccagctttgtagcatctggaaaccgcacagacatctctctggatgacccc
aatttctgggacaagtgggccaagaaagctgacattgatatggatatggtcaatggcaga
aacagcttagtgatcgacactccccgtgtaagaaagcagacgagacctttcagtgccacc
aaagatgagttggcagagctgtcagagggtgaaagtgacagcgatgagaccaagccgaag
ctcagaagaaacgagcgcctcaacaattacggtcgcacggagtgcttcagagtggagaag
aatttgcttgtatatggatggggtcgatggaaagacatcctcaaccacggtcgctttaag
aagcagctgactgaatgggacgtggagtccatctgcagagcccttctagcttactgcctg
gtccattatcggggcgatgacaaaataaagagcttcatgtgggacctcatagcgccgact
gaagacgggcgaaccaaggagctgcagaatcacctcggcttgtctgccccagtacctagg
ggcagaaaaggcaagaagatgaagacccaaactagttcttttgacatccacaaagctgag
tggctccggaaacacaaccctgagcacatgctgcaggacgacggctacaagaagcatctg
aaacatcattgcaacaaggtgctgctccgggtcagaatgctctactacctgaaacaagag
gtgataggaagtcaggcccagaaggtgctagacggcggggactccagtgaggtaaagatc
tgggtgccagatccggaccactcggagctgccagccctatggtgggatgcagtcgccgat
aaatgtctgctgctgggtgtctttaagcatgggtatgagaagtacaacactattcgcgca
gacccaactctgtgtttcttagaccgcgtcgggcgaccggatgagaaggccatcgctgca
gagcagagaggcaatgacttcatggatggggatgtggatgatccagagtacaagcctgct
ccagctcttctgaaagacgacatggaggatgacgcctcttcccctggagacttagtcgtc
tctgataatgctggagacgcgcctccagtgacggaaggccagacttcctactggccctcc
ccctcagtgttgacagccagactgagacgactgatcacggcgtctcagcgctacaccaag
agccggcagatcctacacatccaccagactcagtcccagtctcaaccccagcaggccatg
atgctctctgcccccatctgcccgctgccccccacactcaaagacacactcaaccccaag
atggctgcaaagattgaacgccagcagaggtggacaaggcgagaagaggcagatttttat
cgggttgtgtccacgtttggtgtcgtttttgacccgaacctcgcgcaatttgactggacc
aagttcagggccatggcccggctgcacaagaaaacggacgagagcctgcagaaatacctc
tgcgccttcactgctatgtgtagacgagtgtgtcgcctgccacctaaagatggagattct
gcggtggatccatccctgaccatccagccaatcacagaagagcgagcctctcgtaccctg
tacagagtagagctgcttcgccaggtcagggaacaagtcctcagacacccactactgttt
gaacgtctgtccctgtgcctggtgagctccgacttacccgtgtggtgggaggctggaact
cacgaccgcgacctgctgatcggcgccgcaaagcacggcgtcagtcggacggattaccac
attctgagagaccccgatctgtgcttcatggcagcccaacgcaactacagccagatgaaa
gccgcacagcagcagcagcaacgcacaacaaccccgctcctgctccctcagtaccaggct
gccggaccgttaccgacgggctccccgctgcctctgcccacccagagagacccggatccc
tgtgggattgtgcctaaagtggaagcagcctcagaggaagaggagactaaagaaagacag
ggggagagctggagccccccgcagcctccagcgactccgacaggcctggaggagaagcct
gtttctgtggtgaaggacagcgagaggcagatggtggcggcgcgcaccaagccgctcaca
cccaactccacagaaaggaaacccaagaaggcgagcaaaaggggccgcagggaggcccgg
cgaggctctgagtcagactcggacggttcctcctctagctcttcgtcacgatcttcttca
tcctcatcttcatcttcttcctcctcctcacattccgggtccagctcttcctcctcatcc
tcgtcttgctcctctggctcttcgtcatcatcgtcatcctcctcctcctcttctgatgac
agtgaaagtgagggagaggaagcaaagaagaaagtgcctgtaacaacaagtgttaagggt
ttcgatgaggacagcgtggcctccctgagcaccacacaggacgaaatgcaagactcgcat
gtgtctgagaatggagtcacaaacaactcctcccatcctttccagggtggaggctacatg
ttggctgcatcgtactggcccaaggaccgtgtgataatcaaccgtctggatagcatctgc
caggccgtgctcaagggcaagtggcctggccatcgtcgggtctacgagcccggcagcacg
gtcgcctccttctacaccaccaaactgctggacaacgccaacagcctgtgcgaggacccc
tctgcctctccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctca
gtaaagctcaatgatcaggaaggaggtctgaagctgaccttccagaagcagggcttgcct
ataaagagacccttagagtccgaggagggcccccaggcccagcaacagtatctggcccgg
cttcatgagctgcagagcgcttcggacacaggcctggcagacatgaccaagcctcaaagc
tctttccagactgttactccaggtgttagtggtcagatgaggttgaacggcgtaatggac
ggccagccagtggttaagaagcgacgggggagaaggaagaatgtagaaggaatggagctg
ctcttcatgaacaggaataaattatctgctactcctgactcggtggctccaggatggggt
ggaatcggccaggtgggcatcacaggagctgctgcacaaatgaactctagtcagatccct
gcagacacagacaccaggatccccgttatcaacctgaaggacggcacccgactagcaggc
gacgatgctcccatgaggaaagacctggaccagtggcttagggaacacccaggctttgtt
gcagatacaggagcttttatcccggaagttaataagatgcagatgcagttccatttccaa
gatggccgacccaagcagaagcggcaccgctgcaggaaccccaacaagatcgacgtcaac
agtctaacgggcgaggaaagagtccagatcataaacaggagaaatgctcggaagatcggt
ggcgcttttgctcctcctctgaaggatctgtgccggttccttcaggaaaatccagagtat
ggggtcccacctgaatgggctgacgtggttaaacagtcgggttatctcccggagagcatg
tttgaccggattctgactggacccatcgttcctgaggaggtgagccgacgaggacgccga
ccgaagaatcccctggccaaggcagcggtggctgcagcggcacccagctctgcaccctcc
gccctgggtttaaattccctgctggctaacggtctcctctctggcatggacctcggcagc
ctgcaggccttccagcaaaacctccaaagtttacagtccctgcagctcactgcaggcctc
atgggactgccgccagatgccagcaacctggccgcgagcaatctcgccgccatgtttccc
atgatgctttctggtatggccggattgccaaacctgctcggcatgagcggcatggttgga
aagcctactcaggacactgcgggaggttctgaagagaagacgaagggaactgacagcagc
ggaacatgcgagccgcctaataccccctctaacacttcggaaaccaaaggagaaaggaca
gaggacgtaaacacgactccttcctccacttccagttctgcttcctctgccactgtcaca
ccaagtgcttcagctgcctctgcagccaccagtcacccactctctcttaaccccttgtta
ctctccagtatgctttacccagggatgcttctcactccaggccttaaccttcctgtgtct
gccacacagccgcagagctcaaacagtgacccttcaacccttgcatctgctgctgctcct
cttctgtctgctcccgcagcctcccagtcctccctgactgaaatggagcagccgtcagga
aaagaggaagaggaggaggaagaggcgcctgaggaggctttggacgacgaggaagaggat
gacgaggaatctgcagaaccgagagaaaacagcggccctgaaggttcagcaaaagccgag
tcatcttcgtcggagtccgggagctcttcctcatcctctgatgattcggactccagtgac
gaggactga
DBGET
integrated database retrieval system
