Poeciliopsis prolifica (blackstripe livebearer): 129364710
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Entry
129364710 CDS
T09758
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129364710 (trpc1)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129364710 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
129364710
NCBI-ProteinID:
XP_054893501
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MHISAWPYSLSVVMAALYQGTDTSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENCHGELNVNCADVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSDDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMGTVLSLALLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFTLKIVAHSKFKN
DQETERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDHAKDTKDQIKQTKDCEGIFCQQQSNDAFHTFMGTCYAL
FWYIFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIAN
HEDKEWKFARAKLWLSYFDDKCTLPPPLNILTSPKTVCYLVTSLRKWICSHTSKGKVKRQ
NSLKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENLNDLRQDLSKFRNE
MRDLLGFRTSKYAMFYPRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacacctcctcccccgacaaattcctggccttgaaagacgtgagagaagtgaaagag
gagacgacgctggacgagaagctcttcctgctggcatgtgagaaaggcgactattacatg
gtgaagaagctgctggaggagaactgccacggggagctcaatgtcaactgtgcggatgtg
ctgggccgggatgcggtgaccatcacgatcgagaacgaaaacctggacatcctgcagctt
ctgctcgagcacggctgccaggccacagatgccttgcttgttgctatagactcggaggtt
gtgggtgctgtggacatcctcctcaaccacagaccaagacgctcctccaagccctctatc
gctaaactgatgcagcggatccagaacccagagtactccaccaccatggatgtggctcct
gtaatcctggcagcacacagaaataattatgagatcctcaccatgctgctgaaacaggat
atctccctccctcggcctcacgctgtaggttgcgagtgcatgctgtgcaatgctaaaaac
aagaaggacagcttaaggcactccaggttccgactcgacatctaccgctgcctagcgagc
ccctctcttatcatgctgactgaggaggaccccatactacgagcatttgagctcagtgca
gacctgaaggagctcagccttgtcgaggttgaattcaggaatgactacgaagaactggcg
aaacagtgcaaaatgtttgccaaggatcttctggctcaggctcgaaactctcgagagctg
gaagtgattctcaatcacacctccagcgatgatcatgttgacaagaggggcctgctggag
gagcgcatgaacctcagccggcttaaacttgccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcagcagttcctcaacaccgtctggttcggagagatggccagctac
cgacggaagcacacatgtttgaagatgggcacggtcctgagcctggcgctgctctggccg
ctcctctctgtgtgctacctgctggtgccccgctcccgagtcggccagataatccacacg
ccattcgtgaagttcatcatccacagcgcctcctatttcacctttctgctgctgctcaac
ctgtattctctggtttacaatgagggcaagaagaacacaatgggccctgcactcgagatg
attgattacctgctgatcctctggatcataggaatggtgtggtcggacgtgaaacgtttg
tggtacgaagggctggaagactttctggaagagtccaggaaccagctaagttttgtgatg
aattctctctatctggcaaccttcactcttaaaatagttgctcatagcaagttcaaaaat
gatcaagagacagagaggaagaactgggacgccttccatcctatcctggttgctgagggc
ctcttcgccttcgccaacgttctgagttacctgagactcttcttcatgtacaccaccagc
tccattcttgggccactgcagatctccatgggtcagatgttgcaggagtttggaaagttt
ctgggcctcttcctgcttgtgttattctccttcaccattgggctgacccagctctatgga
aaagaccacgctaaagacacaaaggaccagattaaacaaaccaaggactgtgagggtatc
ttctgccagcaacagagcaacgatgcatttcacacgtttatggggacctgctatgctctg
ttctggtacattttctccttggcgcatgttgcgctcttcgtcacccgcatcagctacaca
gaggagctgcgctcctttgtcggtgccctgatcataggcacctacaacattgtggtggtt
atcgtgctgaccaagctgctcgtggccatgctccataaaagtttcagacaaattgctaat
catgaggataaggagtggaaatttgcacgggccaaactgtggctcagctactttgacgac
aagtgtaccctgcccccacctctcaatatcctgacctcgccaaaaaccgtctgctacctg
gtgaccagcctgaggaagtggatctgttctcacacttccaagggcaaagtgaagagacag
aacagtctcaaggagtggaagaatctgaaacagaaacgtgatgagaactaccagaagatt
atgtgctgtctagtacaccgctacctgacctccacgaggcagaagatgcagagcatggat
caagccacagtggaaaatctgaacgacctacgccaagacctgtccaagtttcgcaacgag
atgagggacctgctgggcttccgcacatccaaatacgccatgttctacccaaggagttaa
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