Poeciliopsis prolifica (blackstripe livebearer): 129364749
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Entry
129364749 CDS
T09758
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129364749 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129364749 (spata13)
Membrane trafficking [BR:
pprl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129364749 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
PRRSV_Env
Motif
Other DBs
NCBI-GeneID:
129364749
NCBI-ProteinID:
XP_054893569
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MSRAEQKDKVLSRSEDPLQCLHRPNLDPLIRNRPLSDIYPSEVFADRSSVPYLLSGCGAQ
VQPVGAALISDESRINGINPSAWSNPMIGQAEGRPHNSRIMRLFSNSRKGVIPPNSPTAD
CPNNDSPQPWTGFSGLGVVDSFKKLRSSVLQGIQSKGAATSNLGQNVPLADVKMPNGSAG
SSSKSEPADSAHHLTTAEGNLVSNGSLADQKSATVEQYGSDIEDYDDEEAESGLTRNSRF
SRSMRKAYGTGRITLLDTNNGRSVASDRNDTTSSTQIPNRTSKVDVQTETQKENINVNVL
SRLSKSAENLHIFRRKSHCPGPPSPQEDPQRIALSNGTSSIQRTASTSSVDLRGRRSPMK
NKGPMVKLIGSMTDLTSRRKQSPSPSPTSTSPMSPLSRLHDDYSRRLPCLQSSERQRRPV
AVTAQVSSVRCTPLIHAQPEDNADLQSHRGVAIPLSSGPRDSAEQISADISAQHELLPAS
TTSNAKQMVECVSPPLSKGEASQQQPDFASIPNEVKSHLQEQESFLLTEKVPPAGSSPPP
DLPACLSNSDVSPTPPTDGAAASTETASVKPRQRSGRPRPRPISDYAQLVSRKHCIPEEG
AEANYEERTSDAQLQENCSSNGNSSNLDNCSLNGEVQRHRPVSVIGAVDLFATDTELKED
RLPSPLSRPPIPSHKVPPYRGVSARFRPCALSQSTPIGLDRVGRRRLHRVLSAGVSECSA
TLDDSVSEEEEESSFEELADGTPYLQPGVELSVLNEWIISGHAVYAEALWDHVTMEEQEL
AFKAGDVIRLLDASHKDWWWGRGGDREAWFPSSFVRVRVNQEDSSTESVESVADQEDPVP
RDKPSTQHREQMRTNVVQEIMNTERIYIKHLRDICEGYIRQCRKNSSMFTELQLKTIFSN
IEDIYRFQRQFVRELEKKYNKEEPHLSEIGSCFLMQGEGFSIYSEYCNTHPAACAELQRL
MKMGKYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHRDHTGVS
QAYEAMKKVASLINERKRRLESIDTIAHWQVAILHWEGPDVLERSSELIHSGELTRAVRQ
GKPQQRSFFLFDHQLVYCKKDVLRRDLLHYRGRLDMDEIEVVDVADGRDPDLGLTLKNAL
RLRNASTLEFMCMLCCRKVEDKQRWLQAFAKERQRVKEDEEMGIDISDEQRKQAIANARR
PKHGKIKTVGYADSVPPHQNLPPLQQRHITIPTSVPQQQVFSLAEPPRRKPHHLLYSITR
SAFFRK
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacagaaggacaaggtcttgtcccgaagtgaagaccctctccagtgt
ctgcatcgcccaaaccttgatcccctgatccgaaacagacctctgagtgacatatatcca
tccgaggtctttgctgacaggagctctgtcccctacttgctgtctgggtgtggtgcccag
gtacagccggtgggtgctgctctgatctccgatgagagcaggataaacggcatcaacccc
tctgcctggtccaaccctatgataggtcaagctgaaggaagacctcataactcaagaatt
atgaggctgttttcaaactccaggaagggtgtcatccctcctaacagtcctactgccgac
tgtccaaacaatgacagcccccagccgtggaccgggttttcagggctgggtgtggtggac
tccttcaaaaagctacgatcgtccgtactgcaaggaattcagagtaaaggggcagcaaca
agcaacctcggacagaatgtaccattagcagatgtgaaaatgccaaatggatcagctggg
agcagctcaaaaagtgagccagctgattctgcacatcatttaacgactgcagaaggaaat
cttgtatcaaatggaagtttagctgaccaaaaatcagcaacggttgagcaatacggctca
gatattgaggactatgatgatgaggaagctgaaagtggtctcacacgcaattcccggttc
tccagaagcatgaggaaagcatacgggacaggaagaatcacgttacttgatacaaacaat
ggaagaagtgttgcaagtgacagaaatgacactacaagcagcacacaaataccaaatcgc
acatcaaaggtggacgtccagacagagacccagaaggaaaacattaatgtgaatgttctg
agcagactcagtaaaagtgcagagaacctgcatatatttaggcgtaaaagccattgtcca
ggtcctccatccccacaggaagaccctcagaggatcgcattgtcaaatggaacctcaagc
attcaaaggaccgccagcacttcctcagtggacctccgaggcaggaggagcccaatgaag
aacaaggggccaatggtcaagctaatcggcagcatgactgacctcaccagccgacgaaag
caaagtccatccccaagtcccacgtcaacatctcccatgtcccccttgagccgtctccat
gatgactactctcgccgtttgccttgcctgcagagcagcgagcgacagcgtcggcccgta
gccgtcaccgctcaggtcagctctgtcagatgcactccgcttattcacgcccagcctgag
gacaacgcagacctgcagtcacatcggggtgtcgccatcccactttcctcagggcccaga
gattcagcagagcagatttcagctgatatctctgctcagcatgagctgctgcctgcttca
actaccagtaatgctaaacagatggttgaatgtgtttcacccccactcagcaagggagag
gcatcgcaacaacaacctgactttgcctcgataccaaatgaggtgaaatcccaccttcaa
gaacaagagtcgtttctcctaacagagaaagtgcccccagcaggcagcagcccacctcct
gacctcccagcatgcctctccaactcagacgtatcgcccacacctcccacagacggagct
gcagcttccacagaaaccgcctctgtcaagcccaggcagaggagcgggcggcccagacct
cggccaatctccgactacgcccagctcgtttccaggaagcactgcatccccgaggaagga
gcggaggcaaactacgaggaaaggacgtcagatgcgcagctgcaggaaaactgcagctcc
aatgggaacagcagcaaccttgacaactgtagtcttaacggggaggttcagagacatcgg
cccgtctcggtgatcggggccgtggatctgttcgctacagatactgagctcaaggaggat
cgccttccttctcctttgtcacgaccaccaatcccctcccacaaggtgcccccctacaga
ggagtgtctgccaggttccgaccctgcgctctctcccagagcaccccgatcggactggac
cgcgtggggcggcgcagactccaccgagtgctcagcgctggtgtgtctgagtgttcggcg
acgctggatgacagcgtgagcgaggaggaagaggagagcagctttgaagagcttgctgat
ggaacgccctacctccagcccggggtggagctctccgtgctcaatgagtggataatctcg
ggccatgccgtgtacgccgaggctctctgggaccatgtgaccatggaggagcaggagctg
gccttcaaggccggcgatgtgatccgcctcctggacgcctcccacaaggactggtggtgg
ggcagaggaggcgacagggaggcctggttcccgtccagctttgtgagggtccgtgtgaac
caggaggactcgagcactgagagtgtggagagcgtggcggaccaggaagatccggtcccc
agggataaacccagcactcagcacagggagcaaatgagaaccaacgtggttcaggaaatc
atgaacactgaacgcatctacatcaaacacttaagagacatctgtgagggttacattcgt
cagtgccggaaaaactccagcatgttcacagagctgcagctgaagacaattttcagtaac
atagaagacatctacagattccagaggcagttcgtcagagaactggagaagaagtacaat
aaggaagaaccgcatctcagtgaaatcggctcctgctttctcatgcagggcgagggattt
tcgatctactctgagtactgcaacactcatcctgctgcctgcgctgagctgcagcgtctc
atgaagatgggcaaatataaacatttctttgaggcctgccgcctcctccagcagatgatc
gacatctccatcgctggtttcttgctcactcctgtccagaagatctgtaaatacccactg
cagctgggggagctcctcaagtacacgcccaaagaccacagagatcacaccggtgtgagc
caagcttacgaggctatgaagaaagtggccagtttaatcaatgagaggaagcggcggctg
gagagcattgacaccatcgctcattggcaagtcgccattctgcactgggagggccctgac
gtgctggagcgcagctcggagctgatccactccggcgagctgacccgtgccgtccggcag
ggtaagccgcagcagcgcagcttcttcctgttcgaccaccagcttgtctactgcaaaaag
gacgtcctgcgcagagacctgctgcactaccgaggacgtctggatatggacgagatcgaa
gtggtggacgtcgctgatgggcgggacccggacctgggcctgaccctgaaaaacgccctg
cggttgcgtaacgcctccaccctggagttcatgtgcatgctgtgctgcaggaaggtggaa
gacaagcagaggtggctgcaggcctttgccaaggagagacagagggtgaaggaggacgag
gagatgggaatagacatcagcgatgaacaaagaaaacaggccattgctaatgccagaaga
ccaaaacatggaaagatcaaaaccgttggctatgccgactctgtccctccacaccaaaac
ctccccccccttcagcagcgccacatcaccattcccaccagcgtgcctcagcagcaggtg
ttttctctggccgagccgcccagacgaaagcctcaccacctgctatacagcatcactcgc
agcgccttcttcaggaaatga
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integrated database retrieval system
