Poeciliopsis prolifica (blackstripe livebearer): 129364784
Help
Entry
129364784 CDS
T09758
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129364784 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129364784 (pan3)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129364784 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
129364784 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
Pkinase
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129364784
NCBI-ProteinID:
XP_054893620
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MNSGLPPSAAPLGGAGIPSVKVKFCRYYAKDKTCFYGDECQFLHEDPSMGSMSLHGGGGS
PVPLPMAGGGGTPAGYSLGGTATVCPGGGGTGVSKKSEALGPAGTALEGQLLTIPGMEGP
ALSDANLTNSYFSSSFIGVNGFGSPAESKYTMMQRMTTSSSSPSLLNDGAKNFSHSTHDP
VNSSTSSLFSDFGALSISQRRKAPNPAASEFIPKGAPRMAAMTQSAVQPFPSPLFAHPGL
GGSTAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTTAADQGAHIIQ
KETVGGTTYFYTDNTPVPMAGMVFPTFHIYPPTAPHVAYMQPKANAPSFFMADELRQELI
HRHLITMAQIDHSENPDVPSEVDSYHSLFPLEPLPPPNRMQKTSNFSYITSCYKAVNSKD
DLPYCLRRIQGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKAFGDHSLVFSYDFHAG
AETMFSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHTA
GLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQYQQADLVSLGKVVL
ALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTDQSRLRSVNDIMPMIGARFYT
QLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWSETGDRYLLKLFR
DHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFDST
FQELQAAAAGSL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcggacttccaccttccgctgctccgctcgggggtgccgggatacccagtgtc
aaggtgaagttttgccgatactacgcaaaagacaaaacctgcttttacggagatgagtgc
cagttcctgcacgaggatccctccatgggaagcatgtcgctgcacggaggtggcggcagc
cccgtcccgctgcccatggccggaggtggcgggacgccagcggggtattccctcggtggt
acggcgacggtctgcccaggcggtggagggaccggagtgtccaagaaaagcgaagcactt
gggcctgcaggcacggctttggaggggcagctgctaaccatcccagggatggagggtcct
gccctcagcgacgccaatcttaccaactcttatttcagcagcagcttcattggtgtcaat
gggtttggaagccctgcagagtcgaaatatacaatgatgcagcgaatgacgaccagcagc
agctctcccagtcttctcaatgatggtgccaagaatttcagccacagcactcatgatcca
gtaaactcctcgacttcgtcactgttcagtgattttggtgctcttagcatttcccagagg
agaaaggctcctaaccccgctgcaagtgagttcatccctaagggcgctccgcgaatggct
gccatgacgcagtctgcagttcagcccttcccttctccactctttgctcatcctggtctc
ggaggctccacagctgctttggctccaggtatgtctttgtctgctgggtcatctcctctg
cactccccaaagatcacacctcacacctcacctgcccctcgtcgacggagtcacaccccg
aaccctgccaactacatggtccccaccactgcggccgaccagggcgcccacatcattcag
aaagagaccgtaggggggacaacgtacttctacacagataacaccccagtgccaatggcg
gggatggtgtttcctaccttccatatctacccccctactgcccctcatgtggcttacatg
cagccgaaagccaatgccccgtccttcttcatggctgatgagctccgacaggagctgatt
cacaggcacctgataaccatggcccaaatcgaccactcagagaacccagatgtaccgtct
gaagtggacagctaccacagcctgtttcccctcgagcctcttcccccgccgaatcgcatg
cagaaaaccagcaacttcagctacatcacctcctgctacaaggcggtcaacagcaaggat
gacctgccatactgcctgaggaggatacagggtttccgccttgttaatacaaagtgtatg
atgctggtagacatgtggaagaagattcagcactcgaacacggtgacacttcgagaggtc
ttcaccacaaaggcctttggagaccactcattggtcttctcatacgacttccatgcaggt
gcagaaacgatgttcagcaggcattttaatgacccagcggcagactcatacttcacaaag
aggaagtgggggcaacacgaacctccgccgccgcggcagcatgcaggccttctgccagag
tcgctgatctgggcctacattgtccagttaagctcggccttgcggaccatccacacggct
ggtcttgcctgtcgggtcatggaccccagcaagatactcatcactggtaaaaccaggtta
cgggtgaactgtgttggggtgtttgatgtcttaacgtttgacaacagtcagaccaatcat
cttgccctgatgccgcagtaccagcaagcagatctagtttctctgggcaaggtggtgctg
gctttggcctgtaattcgctggctggaatccagagggagaacctgcagaaggccatggag
ctggtttctataaactactcttcagacctcaagaaccttattctgtacctgctgactgat
caatctcggctgcgcagcgtcaatgacatcatgcccatgattggagcacgattctacacg
caactcgatgcatcgcagatgagaaatgatgtcatagaagaggaccttgcaaaggaggtg
caaaatggtcgccttttccgcctgcttgccaaactgggaaccatcaacgagcggccagag
tttcagaaggacccggcgtggtcggagaccggcgaccgctacttgctgaagcttttccgg
gatcacctgttccaccaggtgacggaggcgggaacgccgtggattgacctcagtcatatt
gtctcctgtctcaacaaactggacgcgggtgttcctgagaagatcagcttggtgtcccgg
gatgagaagagcgtcctggtggtcacctattcggacctgaagcgctgcttcgacagcacc
ttccaggagctgcaggctgcagccgctggctctctgtag
DBGET
integrated database retrieval system
