Poeciliopsis prolifica (blackstripe livebearer): 129364855
Help
Entry
129364855 CDS
T09758
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129364855 (rttn)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129364855 (rttn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
DUF2526
Motif
Other DBs
NCBI-GeneID:
129364855
NCBI-ProteinID:
XP_054893747
LinkDB
All DBs
Position
Unknown
AA seq
2248 aa
AA seq
DB search
MELSPLIKKIGHTLVEIRVRALKSILSKLDHSLITVTDIVQEKMLFVYLLEWFNFPEVPM
KEEVLGLLLTLSKHPSSAQMLRDVGAVDFLSQLSPTIEPRLRAVIDGTLDQLFQLPELVP
SHSAVYSHGPCSTTTTAPTLVPVDDNVPKMGYFHKSMHYNTNVPPQKMAVRESVRCLKFF
VFPWLTLTNTDRHILSSNESSLGSSNPNMVRTTCELLCDVILQDFPAEIFLQRPGIVKNL
LLLLRVSSGKGEVSSLHSSALSCLRQLCVGLKRRLRFHQDPGFYSAKQDPVSQNSSFSYT
QEVWGNQRSQASSPVAECSPRPSVVGRTGQRARGDGQDGDAVSSSGSSHGGGARALAPQQ
TLRSPADAAHLELPDLSVEDVLELQLQQLSVAQFTVATMRHAIPLLKTEGLHAFHRVLEL
LCDALLLLGDSVCELVWDDRSLVGMELKEKLQACMEQLGDVLFFHQNHSAEASHSSQVSH
RMAYLGTAIFTIRLLQTILPPEKASENLPENAATAIFHLCLDSSLGSLLPSMQETAVAYL
EQVDSEYHSLYRRVNRAAFWMESTCNFMKEAQAEGEKNWLDLLELADHAIDGLPFHQHLS
IVKECVHMCSYLWKFDQPSPLLQTESQKLFLKLLSHPSPPVKTETYECTLNLVKDCLGIQ
NLSRQEAAACASVNFLLHHRVLYEMSAFGLQDSAQTVNVAAKDILLFLLKGRLMMTAGAW
DRFNEALYPVIPILQGYASTEESLGKCVLLISDMSDVTGDNVFPTTGKLKAALRLLFSKQ
PTIRIAAVQHILPQLTSHADANPTRVFADQSAIASLPNLFCLRNPVDVTLDTINKSILKV
ESVEKLFCILDSDTVDISLRRSAAEQLCVVLQDKSMHPVLENLGITERVISFITDNVNGN
KSLDCLLEPCVCILRKLVYADPSLRHSLAQHNRLLLTLLRASLILKEINSNNSEVVVLMC
LLLFDEIACIETWSDKSTTDATLSPFSLPVAVVRRYNIPFKTATHHAVSPYCCILAPSSE
LLSLSLARQALQVAWNAAWHSGIDNLLEKSNSVDCDADEFHPDLKLSKSQLLLLRASHPP
AALRDCIQAIETAAGHKSVASALSRLSIYLFFNRLALPHVPTHNCRDILQLLGWQAVLTR
FLQVRPASVEDERLLVGIVTFLNAYFKQIPTEFTSDQEDQDLCWILKLLLNQETAALLHL
LLGMESQMLTQSLEHPEEIKNHINQRLQKELIKFFNTLLIRLSNTTDRLCLALAGPFKSQ
LALRLLQSLRLSDAPRFYGLPSLERALQGMVSLTAQPGWSSHCPDLEPSSLCSKYLSGLL
EVISSFYVEWRGNSLSFMGKGVTKNAIICLLHLSHEMMIENKDTDFISQWFFGANGTTEE
SGSSQLGLAWLIPLWVDRDQEVRFASLSLGAALSSMPSGCQILCASCQNISGGLWGTLLN
ILLDQQESSMVRREAVFILQNLLVMPMPANAEEAKDSHWQHPCVHDEVSGVSLVGLPALQ
ALLYHCQYFHSVAIYASTCYRGRYTFDLLPRPGGSGSLSLQESSLADSENSLLPWRCDPA
PSINSERSSSSLSTSSTAVSNALQSKSSRLNTPKVSSPVNIPDDTPARLMAQGQSDRDTS
NSSASQDSQPGKPSGMEAVVIVTPDLLTAQCGLLYNLLAILPDFTLTAILENQLLPVLSS
LVDVELMEKCLSELRTPGILPGIREDIKRQFVTALRFLSSFCKLLQSCVTTSKELIGQMD
FLKLLLPNLVAALMLDTKFLDTGTWDAVCACWTDVFTLLATLVRRGTSAAHPSVCATLGR
CWRTFAGTLSQCLDEKKADLLLHTAALQFLSTVFTEETRLCGTELQSSTSKHSSTLSDIL
NGPSASELCELLLQSFEKRTLQDPLKKLTARALMTLLACSPTAQNYAATAGLIDSCVEQL
KQTHSHLHLESIRPSKASTRKKEGGHLKEVKLTAGILRSALYCNDECKAVAMEARLALRL
YALWPWLLLDDPTMEAVLELLCVFTADSQPACSSLCGSSPSGVPGSKGSSNASLMHSVVK
LSSIAPDNSPIQNLSFSLLTNLVVSRDCRCILQKNNFLQAFLLVPVPKVPGAKASSVSGG
GDLLSLWLRFLVSLSATEDGQQNILKVSGVLELLAELAPHRPHALLTLHNLCFCPAIKSH
VMTNDKAMKVLLWCLGSKELETCCIGASALWALLHNNQRAKTALKCPSVRSKIQEALTVS
KKDAEKKQEPLNSYLQKCLDQLSQLLQS
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atggagttatctccgcttataaagaaaataggtcacactttagtggaaattagagttcga
gcgctgaagagcatcttaagtaagctggaccattccctcatcactgtgactgacattgtt
caagaaaagatgctgtttgtgtatctgcttgagtggttcaattttccggaggttccaatg
aaggaagaagtccttggattgcttttaacattatcaaagcatcctagttcagcgcagatg
ctgagggatgttggggcggtggactttctctctcagctttctcctacaatcgagcccaga
ctgcgagctgtcattgatggaaccctggaccagctgttccagcttcctgagctagtcccc
agtcattcagctgtctactctcatggaccgtgcagcacaactacaacagccccaacactt
gttccagttgacgataatgtgcctaaaatgggttatttccacaagagtatgcactacaat
acaaatgtaccacctcagaagatggcagtgcgtgaatctgtgagatgtctgaaatttttt
gtatttccatggctaactttaacaaacacggaccgacacatactttcttccaatgagagc
tctctggggagcagcaatcctaacatggtgaggacaacctgtgaacttttgtgtgacgtc
attctgcaagactttccagcagaaatcttcctgcaaaggcctggaattgttaagaacctt
ttgttgctgctcagggtgagttcaggtaaaggtgaggtcagctccctccactcatctgct
ctgtcctgcctgcggcagctttgtgtgggactgaagaggagactgcgctttcatcaagat
cccggcttctactcagcaaaacaggatccggtgtcgcagaactcgtccttctcttacacc
caggaggtttgggggaaccagcgctcacaggcctcctctcctgtggctgagtgctctcct
cggccctctgtggtgggtcgcacaggccagagagccaggggagacggtcaggacggagac
gcagtctctagcagtggcagctcacacggaggtggggcaagggctctggccccacaacag
acgctccgttctcctgcagatgcagctcacctggagcttcccgaccttagtgtggaagac
gttctggagcttcagttgcagcagctcagcgtggcccagtttactgttgccaccatgcgg
cacgccataccgctactgaagacagaaggtttgcatgcgttccaccgtgttctggagctg
ttgtgtgatgctctcctcctgctcggggacagcgtttgcgagctggtctgggatgatcgc
agcctggtggggatggagctgaaggagaagctgcaagcctgcatggagcaactgggggat
gtactcttctttcaccagaaccattcagcagaggcatctcacagttcccaggtctcccac
agaatggcctacttagggaccgccatatttaccattagactcctacagaccatactccct
ccagaaaaggccagtgaaaacctccctgaaaatgcagcaacagctattttccacttatgc
ttggactcgtcgctgggaagtctattacccagcatgcaagagacagctgtggcctacttg
gagcaagtggactcagaataccacagcctgtacaggagggtgaacagagctgcattttgg
atggaatcaacatgtaacttcatgaaggaggcacaagctgaaggggaaaagaactggttg
gacctactcgaacttgcagaccatgcaatagatggtcttccatttcatcagcacctatca
atcgtcaaggaatgtgttcacatgtgctcttacttgtggaagtttgatcagcccagcccc
ctcctccagactgagagccagaaactcttcctcaagctactgtcccatccttcaccgcct
gtcaaaacggaaacatatgagtgtactttaaacctggtcaaggactgccttggcatccag
aatctatcgagacaggaagcagcggcatgcgccagcgttaacttccttctccaccacagg
gtcctgtatgaaatgagtgcttttggactgcaggactctgctcaaacggtgaacgttgct
gccaaggatatcctgctattcctcctaaagggacgattaatgatgacggctggagcctgg
gacagattcaacgaggcactttacccggtcatacccatattacagggctatgccagcaca
gaggagtcacttggaaagtgtgtcctgctgataagtgacatgtcggatgtgacaggagac
aatgttttccccactacaggcaagctgaaagcagcgctccgactcctcttctctaaacag
cccactatcagaatagctgcagtgcaacacatcctgccccagctaaccagccatgctgat
gcaaaccccaccagagtattcgcagatcaatcagcgatcgcgtctcttcccaacctcttc
tgcctcagaaaccctgtagacgtcactctggacaccatcaataagtccattctaaaggtg
gaatcagtcgaaaagctgttttgcatcctggactcagacactgtagacatctctctcaga
agatcggcagcagagcagctttgtgtcgtactacaggacaaatcaatgcacccagtactg
gagaatctgggcatcacagagagagtcatttcttttatcacagacaatgtaaatggcaac
aagagcctcgattgtcttctggagccgtgtgtatgcatcttgagaaaactggtgtatgct
gatccgtctctgaggcacagcctggcgcaacacaaccgcctgctcctcacactgctcagg
gcttccttgatattgaaggagatcaatagcaataacagtgaggtggtcgtcctcatgtgt
ttgctgctttttgatgagatcgcctgcattgaaacatggtcagataaatccactacagat
gcgactctttcaccattttctctgccagtagctgtagtacggaggtacaacattcccttc
aagacagcaactcatcacgcggtcagcccgtactgctgcatcttggctccttcctctgag
cttttgtccctgagtcttgcccgccaagccttgcaggtggcctggaatgctgcatggcat
tctgggatagataatctcctggaaaaatcaaacagtgttgactgtgatgctgatgaattt
catcctgatttgaagctgtcgaagtcgcagctcttgttgctccgggcatcgcacccgcca
gctgcgcttcgtgactgcatccaggccattgagactgcagcggggcacaaatctgtggcc
tctgccctgtccaggctcagcatctacttgttctttaacagactggctctcccacatgtt
cccacccacaattgcagagacatcctccagttgctcggctggcaggcagtgttgaccagg
tttctccaggtgcgcccggcctctgttgaggatgaaaggttgctggtgggaattgtgaca
tttttgaatgcctacttcaaacaaattcccacagagtttacctctgaccaagaggaccag
gacctatgctggatattgaagctgcttctcaaccaggagactgctgctcttcttcatttg
cttcttggtatggagtcgcagatgttgactcagagtttagaacatcctgaggagattaag
aaccacataaaccagagactgcagaaagaactcataaagttctttaacacgcttctgatc
aggctgtcaaatacaactgacaggctatgtttggcattagcaggcccctttaagagccag
ctggcgctgcgcttgcttcagagcttgcggttgtctgatgccccgcgtttctatggcctt
cccagcctggagagggcactgcagggcatggtcagcctgactgcccagcctggctggagc
tcccactgccctgacctggagcccagctccctctgctccaaatatctcagtggattatta
gaggtgatttcttcattttacgttgagtggagagggaactccttgtcattcatggggaaa
ggtgtgacaaagaacgccattatttgcttacttcacctgtcccatgagatgatgatagaa
aacaaggatacggacttcataagccagtggttttttggggctaatggcaccacagaggaa
agtggcagctctcagcttggtttggcatggctcatcccactttgggtggaccgagatcaa
gaggtgaggtttgccagtctgagtttaggcgctgctctctcttccatgcccagcggctgc
cagattctgtgtgccagctgtcagaacatcagcggaggtctgtggggcacgctgctcaac
atcctcttggatcaacaggagagcagcatggttcgcagagaggctgtgtttatcttgcag
aacttactggtgatgcctatgcctgccaacgcagaggaggccaaggactcccactggcag
cacccgtgtgtccatgatgaggtttccggtgtgtctctggtgggtcttccagcactacag
gctctgctgtaccactgtcagtatttccacagtgtggctatctatgcctcgacttgctac
cgtggcaggtacaccttcgatctgctgccacggcctggtgggagcggtagtctcagcctt
caggaaagctctttagctgattcagaaaattccctgctgccttggagatgtgaccccgca
cctagtatcaactctgaaagaagttccagctccctttctacttcaagcactgcagtcagc
aatgctctacagagtaaaagttcacggctgaacactcccaaagtttcctccccagtcaac
atcccagatgatactcctgccaggctgatggctcaaggtcagagtgatagagacacaagc
aactcgagtgcctcacaggactcccaaccaggcaagccctcaggcatggaagcagttgtc
atagtaactcctgacctcttgacggcccagtgcggcctgctttataatttgctggccatc
ctgccagacttcaccctcactgccatcctagagaaccagctactgccggttttgagcagt
ctagtagatgtcgaactcatggagaaatgtctgagtgagctcaggactcccggcatcctt
cccggaatcagagaagacatcaagcgtcagtttgtcactgcacttcggttcctgtcgagt
ttttgcaaactgctgcagtcttgtgtcacgacaagcaaggagctgattggccagatggac
ttcctgaagctgctgttgcctaatctggtggctgcacttatgctggataccaaattttta
gacacaggtacgtgggacgcagtttgcgcgtgctggacagacgtgtttacgcttctggct
actctggtgaggagaggcacctcggcagctcacccatctgtctgtgccacgctgggcaga
tgctggcggacattcgcaggaacactatcacagtgtctggatgagaaaaaggcagatttg
ctgctccacacagcagctctgcagttcctctccacagttttcacagaggagacgagactc
tgcggcacagaactccaaagctccacatccaaacacagcagcactctgtcagatatccta
aatggtccctctgccagtgaactgtgtgaactgttattgcagagctttgagaaaaggacc
cttcaggaccctttaaagaagctcacagccagagctctgatgacgcttctggcctgcagt
cccacagctcaaaactacgcagccaccgccggtttaattgacagctgtgtggaacagctg
aagcagactcattcccacctccacctggagtccatccgacccagcaaggcttctacccgc
aaaaaggaagggggccatttaaaagaagtcaagctgactgcagggatcctgcggagtgct
ctttattgcaacgatgaatgcaaagcggttgctatggaagcccgtttagctctgagactc
tacgctctgtggccttggctcttattggacgaccccacaatggaagcggtcctggagctc
ctgtgtgtgttcacagccgacagccagccagcatgcagttccctctgtggcagcagcccc
agtggggtgccaggatctaagggctcctccaacgcctctctgatgcactcagtcgtgaag
ctgagctctattgccccagacaacagccccatccagaatctgtccttctctctcctgact
aacctggttgtgtcacgagactgcaggtgcatcctgcagaagaataacttccttcaagcc
ttcctgctggtaccagtccctaaggtgcctggtgccaaggcctcatcggtcagtggtggt
ggggacctcctgagcctgtggctaagattcctcgtcagcctatccgccacagaggacggg
cagcagaatattctgaaagtgtctggagttctggaactgctggccgaactggcaccgcat
cgaccacacgcactgctcacccttcacaacctctgcttctgccccgccatcaaatcacat
gtcatgactaatgataaagccatgaaagttttgttatggtgtttgggaagtaaagagctg
gaaacctgctgtatcggagcatctgcactgtgggccttactccacaacaatcagagggca
aagactgcattgaaatgtccatctgttcgatcaaaaatccaggaagcactgaccgtctcc
aagaaagatgcagagaagaagcaggaacctttgaactcctacctgcagaagtgcctggat
caactttcacagctgctacaaagttga
DBGET
integrated database retrieval system
