Poeciliopsis prolifica (blackstripe livebearer): 129364925
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Entry
129364925 CDS
T09758
Symbol
shrprbck1r
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04217
Necroptosis
pprl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129364925 (shrprbck1r)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129364925 (shrprbck1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129364925 (shrprbck1r)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129364925 (shrprbck1r)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129364925 (shrprbck1r)
Multi subunit type E3
LUBAC complex
129364925 (shrprbck1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
zf-RING_5
IBR_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
129364925
NCBI-ProteinID:
XP_054893850
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MSLSSGGWTHSPGLTPDQSTALTSSYEASQAQPGCQTVLMSVRVSVCHSGVRPLCLPGAG
DESLRLQLSMDPGKSGEFRLAIQSISGTGLSVTINEFDLRSINYEVKSPKCHELISVAPP
CDRIIFNFSSEQEAEGWATVVMSSLREAHRATPQENGLQHLLDGLHLQNTSALQQTEDAC
IELKKAIEAGDMQSASVFAASLARRQAPLKIQPSTKTYEETEINLAVIVEDSSSSCCITV
KVFPHMTTASLKQQMFLEYGFHPRVQRWVIGQCLCTDLRTLASYGIRQDGDTAFLYLLSA
RHSRLTVQVLQKDQESALLLSPPSSFQNPSLPAAFTNGPLSHDGRPFSTLPPRLRRTSNN
ERPNISNIRDQFEMPRLNPNAPSTQGWSCPSCTYINKPTRPGCEICSTNRPENYIIPGGH
QPDALELRRILQEKESIRQYQQAKEQERRENFDRMVKVDGQDLVPNPEPVDCKICFVDLQ
SGEGVLLRECLHCFCKECLRSIIMLCEEPEVSCPYRDDTYACPWALQEREIRALVPPEEY
ERWLQRSLSVAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPVCRKHNCLICKAIHEGMN
CKQYQDDLAARAINDSAARRTTHLLKTLVQSGEAMHCPQCGIIVQKRDGCDWLRCTVCHT
EICWVTRGPRWGPKGPGDTSGGCRCNVNNQKCHPKCQNCH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaagttcaggcggctggactcacagccccggcctcacgccggaccagtccacc
gccctcaccagcagctatgaagcctcgcaggcgcagcctggctgccagaccgtcctcatg
tcggtccgggtctcggtgtgccattccggggttcgtccgctgtgtcttccgggagctggc
gatgagtcactccgcctgcaactgagcatggacccggggaaatccggggaattccggctg
gcgatacagagcatcagcgggacgggcctgagtgtgaccataaatgagtttgacttaagg
tccataaattatgaagtgaagtcgccaaagtgccacgagctgatatcggtggcgcctccg
tgcgaccgcatcatcttcaacttcagcagcgagcaagaggccgagggatgggccaccgtg
gtcatgtcctcgctgagagaagcacatcgagccacacctcaggaaaacggtctacagcac
ctcctcgatggcctccatctccagaatacctcggctttacagcaaacagaggatgcttgc
atagagctgaaaaaagccatcgaggcaggggacatgcagagcgcttctgtcttcgccgcc
tcactcgcccgcagacaggcacccctgaagatccagccctccaccaaaacctatgaagaa
actgaaataaatttagctgttattgtcgaggattcctcctcgtcttgttgcatcactgtg
aaagtttttcctcacatgactactgcgtcgctgaagcagcagatgtttctcgaatatggc
ttccacccgcgggtccagcgttgggtgatcggccagtgtttgtgcaccgacctccgaact
cttgcatcgtacggcatccgtcaggatggtgacacggccttcttgtacctcttgtcagcc
cgccactctcgcctgaccgtccaggtcctacagaaagaccaggagagcgccctccttctc
agccctccatcttcttttcaaaacccctctctccctgctgccttcacaaacggacccctc
tcccatgacgggcggccattttccactctacctccaagactgcgcaggaccagcaataat
gagagaccgaacatcagcaatattagagatcaattcgaaatgcctcgactcaatcccaac
gcaccttctacccagggttggtcttgtccatcttgcacgtacatcaacaagccaacacgg
ccgggctgcgagatctgcagtacaaaccggcctgagaactacattatccctggaggacac
cagcctgacgctctggagctcagaaggatcctgcaggagaaggagtcaatcagacagtat
cagcaggcaaaggagcaggagcgaagagagaactttgaccggatggtgaaggtggacggt
caggacctggtgcctaatcctgagcctgtggattgtaagatctgcttcgtggacctgcag
tcgggagaaggtgtcctgctgagagagtgtctccactgtttctgcaaagagtgcttgcgc
tccatcatcatgctctgcgaggagcctgaggtttcctgtccatacagagacgatacgtac
gcctgtccatgggccctgcaggagcgagagatccgagctttggtgcctccggaggaatat
gagcgctggctgcagagaagcctttctgtagcagagtctcgctgcgagggcagctatcac
tgtgcaactccggattgcctgggatggtgtgtgtacgaggacacagtcaatgtcttccac
tgtcctgtctgtcggaaacacaactgtctcatttgcaaggccattcatgagggaatgaat
tgtaaacaataccaagacgacctcgcagcccgagccataaacgactctgctgccagaaga
acgacacatctgctaaagacccttgtgcagtcaggggaggccatgcactgtcctcagtgt
ggcatcattgtgcaaaagagggatggatgtgattggctgcgctgcactgtctgtcacact
gagatctgctgggtaaccagagggcctcgttggggacccaagggtcctggagacaccagt
ggaggatgtcgctgcaatgtcaacaatcagaaatgtcatcctaaatgccaaaactgtcac
taa
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