Poeciliopsis prolifica (blackstripe livebearer): 129365105
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Entry
129365105 CDS
T09758
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040
Spliceosome
pprl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129365105 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129365105 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129365105 (srsf5a)
Spliceosome [BR:
pprl03041
]
Common components
Common spliceosomal components
SR proteins
129365105 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CDC45
SET_assoc
Motif
Other DBs
NCBI-GeneID:
129365105
NCBI-ProteinID:
XP_054894015
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MSSSRVFIGHLSTHARERDVEKFFKGYGHIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGAPGMGRFGGGGGGGGGGGYRQSRNTRARYGPPMRTDHRL
IVENLSSRVSWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRYDMKNAISKLDGTELN
GRKLKMFEDSRRSRSRSYSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSPSRTPEKKM
SGGSKPAANSPSKSKSRSKSRSKSRSKSRSKSRSKSRSKSRSPAPAQNGKARSRSRSRSR
SRSASAESKH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagtcgtgtcttcatcggccatttgagcacacatgcgagagagagggatgtg
gagaagtttttcaagggatatggacacataagagagatcaacttgaaaaacggatttgga
tttgtggaatttgatgaccacagagacgccgacgacgccgtgtacgagctgaatgggaaa
gaactgtgcagtgaaagggtcaccattgagcacgcccgctccaggagaggcagaggaggc
ggcgccccgggaatgggacgttttggcggcggtggtggtggcggcggcggcggcggctat
cgccaatcccgcaataccagagctaggtatggccctcccatgcgaactgatcacaggcta
attgtggagaacctctcgtcccgcgtcagctggcaggaccttaaagacctgatgagaaag
gcaggtgaagttacctttgtggacgcacacagacccactaaaaatgaaggagtggttgag
tttgcatctcgttacgatatgaagaacgccatctccaaactcgatggaacagagctgaat
ggacgcaagttgaagatgtttgaggacagtaggaggagccgttctcgcagctactcgcgt
tccagaagccgctccaggagcagatccaggagccgctccaggagtcgttccaggagccgg
agccgcagccgctccaggagccgctccagatctcccagccgcaccccagagaagaagatg
tcaggagggagcaagcctgcagctaattccccatccaagtccaaatctcgctccaaatcc
cgctcaaaatcccgctccaaatcccgctcaaaatcccgctccaaatctcgttccaaatcc
cgctctcccgctcccgctcaaaacggcaaggctcgctccagatcccgatctcgctcgcgt
tcccgctccgcctcagcagagagcaaacactaa
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