Poeciliopsis prolifica (blackstripe livebearer): 129365114
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Entry
129365114 CDS
T09758
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129365114 (srrm1)
03015 mRNA surveillance pathway
129365114 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129365114 (srrm1)
03041 Spliceosome [BR:
pprl03041
]
129365114 (srrm1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129365114 (srrm1)
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
129365114 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
129365114
NCBI-ProteinID:
XP_054894024
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLASLKKVDQDKKDKDTRERTRSKSPRRWKTRSPGKRERKR
SPSRSPVRKPSPVVGDSPPPPLMQSNTKTSQQPEEPDTSGTGLPETIIQEASSTGLIDTV
VESVKADSVAEVKEPSPEKSLKKEERPRSREREKETRRERPHHRSRSRSHSRSRRRRSRS
RSYSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASSSGSSSSGSRSP
KKPVKRISTTPPRKQLHRPGASVSPVGKDKRSPSPRTRRGRGSASPPRSSGVKRKPGGRG
DSPPDFVKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPKR
SAPGPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPGRRRRSPSPLRRRRSPSPPRR
RSPSPPPRRRSLSPRRYSPPIQRRYSPSPLPPQKRKLSSSPTKRFSPGPKRRSSRSPKRR
SSPAQRRRSSPSSSSPPRHRRSPPSARPNRDNRSPVMSARRLSPSPANRGRPVRRSTSPQ
RRFDSPSTSPSAQRRQQSPPHSSKLIRRVSRTPEPRNKRISPSPKPIRRGSSRSRSLSPQ
PAALKRPAPAPASASPSPSRSASGSPPPPPPAKKATSGSGSQSPSKNSDVDGGGKKKKKK
KEKKHKKDKKHKKHKKHKKEKSSAAVTDDVQESRPPEEDGDSRKDSESEVDDTLDDLEKH
LREKALRSMRKAQISPSEMS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggcacgagtgcggagcaagacaaccgtttcagcaacaag
cagaaaaaattgctgaagcagctgaaatttgcagaatgtctcgacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggatcactcaacgtgtgactgagattctg
ggatttgaggatgatgtggtcatagagttcatattcaaccaacttgaagagaagcacccc
gatagcaagatgatgcagatcaacctgacagggttcctgaatgggaagaacgcccgggag
ttcatgagggacctttggcccctgctgctgagtgcgcaggagaacatcgctggcatcccc
tctgctttcctggagcagaagaaagaagaaattcgacagagacagattgaacaagagaag
cttgcttccttgaaaaaggttgaccaggataagaaggacaaagacacaagagaaaggact
cgctcaaagagcccaagaaggtggaagacaaggtctccagggaaacgtgaaaggaagcgc
agtccgtcgcgatccccagtgcgtaaacccagcccagttgttggagactctccccctcca
cctctgatgcagtccaacactaaaacgtcacagcagcctgaggagccagacacgtcagga
acaggcctgccagaaaccattatccaagaagcttcgtctacagggctaattgacacagtt
gtggagtcagttaaagcagactctgtggccgaagtcaaagaaccgtccccagagaaatcc
ctcaaaaaagaggaaagaccgaggtctcgtgaaagagaaaaggaaacaaggagggaaaga
ccccaccaccgctctcgctcacgttctcactctcgttctcgcaggcgacgctcccggtct
agatcctactcccctcgtagaagacaaagtcccaggaggagaatgtctccccgtcgcagg
agtccccctagaaggggccccaccggctccaggcacagacaccggcggtctcctgttcgc
aggaggcgttcccgttctgcttcatcttctggtagcagctcttcagggtcacgttcacct
aagaaacctgtgaagagaatatctaccacgccgccccggaaacagctccatcgtcctggc
gcttctgtaagccccgttgggaaggataaacgctcgccgtctcctcgaaccaggagaggc
cggggctccgcttcaccaccaagatcatcaggtgtaaagcgaaaacctggaggaagagga
gattctccacctgattttgtaaaggccagaacctctgaggggtctgagtcagaggaggat
aaaaatgaaaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcaggcag
aatcaacagtcctcttcagattcaggatcttcctcctcagaagatgaagggcctaagagg
tcagcaccagggccaggcgccagaaatggtgaagtcaggaggaaacgcagccgtacgcct
tcacctcgtaggagacatagagatccctccccaaggaggagacgttctccatctcctgga
cgcagacgtcgctctccttctccccttcgacgtcgtagatctccctcccctccaagacgc
aggtctccttcccctcctccccgtcgtcgctctctgtcccccagacgatattctccccca
atccagcgtcgctacagcccctcacctttgcctccgcagaagaggaagctgtccagttct
cccacaaagcgcttttctccaggccctaagcgacgctcctccaggtcacctaaacgtaga
agctctcccgctcagcggagacgctcgtctccttcctcctcgtctcccccgagacataga
aggagcccaccgtctgccaggccgaacagggacaaccgatcccctgtcatgtctgctaga
cgcctctccccctctcccgctaaccgaggtcgccctgttcggcggtccactagtccccag
agacgctttgattcgcccagcacgtcaccctccgcccagcgaagacagcagtcccctcca
cacagcagtaagctcatccgtagagtgtctcgtaccccagagccacgtaacaaaagaatc
tcccccagtccaaagcctataagaagaggttcgtccagatcccgatcgctttcccctcaa
ccggcagctctgaaacgtccggccccagctccggcctcggcttccccgtcaccttcccgc
tctgccagcgggtctccacctcctcctcccccggccaaaaaggctaccagtggttctggc
agtcagtctcccagcaagaattcagatgttgacggtggtggaaagaaaaagaagaagaag
aaggaaaagaaacacaagaaagataagaagcacaaaaaacacaagaagcataagaaggag
aaaagcagtgctgctgtgaccgacgacgtccaagagagtcggcccccagaggaagacggt
gattcaagaaaggactcagagagtgaagtcgatgacaccttggacgatctggagaagcac
ctccgagaaaaggcactgcgctcaatgaggaaggcccagatatctccttcagagatgtcc
tga
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