Poeciliopsis prolifica (blackstripe livebearer): 129365130
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Entry
129365130 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129365130
04518 Integrin signaling
129365130
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129365130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
129365130
NCBI-ProteinID:
XP_054894064
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MSLHGGGTKLKTSSALPLLPPQLGDLMGRAXQLSASSTCGVDGPQNYCIVGHLEGEKKCF
TCDSRLSFSPQGNPQSHRIENVITTFDSDRRLKWWQSENGVHQVSIQLDLETVFQFSHIV
LTFKSFRPGAMLVERSKDFGRSWKVFRYFADDCSLHFPSVPAEPASFLDDVVCDSRYSGP
EPSTGGEVVLKALDPVFEIDDPYAPDIQELITLTNIRVNFTRLFTLGDTLLARRRRNPQE
KYYYSLYSMVVQGSCFCNGHASRCVPVDGGRGDVFTQSGMVHGRCVCQHNTAGENCERCQ
PFHNDAPWKPGGETAPNICRRCNCHGHSDSCHFDAARFEETGGTSGGVCDDCRHDRTGPQ
CERCRPFLYQDPQRALEDPHACIPCDCDPAGSHSGGLCDASSGRCFCKENVEGQRCDRCK
HGFFNLRSDNPAGCEACRCHGLGSVGPCNPLTGRCKCEPMATGPLCDQCVAGFWGLGNSV
FKCSPCDCDVGGSSSNMCSPEDGQCSCLPNMVGRRCSDPAPGHFLPSLIYFLYEAELAAQ
LTGGSSSPSPPAPLPAFPSSSPLVNPGLLPSCEQYYRSQGYDFQLSDGKVXLIRRPRHLT
RRRRRQNNTPLIQGPLQILAHQGSPEQSGTGLGLVRVTEGAGLRFTVDNLPTSMEYHLVI
RYESESVADWVARVNIITLSPGDGGCSDDPPTGSLTLILPRSSRLGILDSRVCLNARGRY
HVEIFFDRQQRSDEALLLVDSMGLVQSFYSGQDSCSQSDFDSFSHFRCVGLDVYLGSQES
LPRICEGLIKSLSARIHKGAVACRCNVFGSLGSGCSPLAGLCDCKPSVIGRCCDACAPLT
FGFGPEGCKRCECDPQGSLSEACDPSGGQCACRPQVSGRRCDRCESGFWGFPLCQPCDCN
GLSETCDGRTGACVNCREHSSGPHCDRCVEGYYRNPVSRQPCQPCLCPDILSSGRFFASS
CRYDPQSVSVSCSCREGHAGERCDRCGSGFYGDLRSPGAVCRACSCNNNIDPDDSDACDS
TTGECLRCLHYTTGPQCQFCQPGFYGNALQHTCRECSCDRRGTKATLCPPESPCFCNRET
GQCPCRTGVVGDLCDECEDGFWNLDGASGCQPCSCDPSNSISDVQQVAQDTRDQAQVLQR
QISDTIQSVEREKNQTRELLQRVKQYLMDDMVSPDDIEKMANAVLRIQLPRSPAEIQSMI
NEINNLLNGATKFQEDLKKLQDEAKAAQELLQKATEVKEQTKTINVKDILSDLIAADAAQ
SNANDDLEVANKDRDDAKDRIQEVENKLSRKEDQLMNQPVDLLEEIEALKNKTEQNREMA
KEARETAESALTNISNDTELQEVEEQFELLKQKHLNKTLEDEAADRLQKILKETEDMQRQ
MEDRLQQIEGYHPKIQLLIQRKKEKIVEVADLLQTVESLQMEIASRAENSTACSS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcatggaggaggaactaagctcaagacctccagtgccctgccgctcctgcca
ccccagcttggtgacctgatgggtcgagcgncgcagctctcagcctcgtccacctgcggt
gtggacggaccccagaactactgcatcgttggacacctggagggggagaaaaaatgcttc
acatgtgactcccgactgtcgtttagtccccaaggcaacccacagagccatcgtatcgag
aacgtcatcacgacgtttgactccgacagacgactgaagtggtggcagtctgagaacgga
gttcatcaggtcagcatccagttggacctggagacggtcttccagttcagccacatcgtc
ctcaccttcaagagcttcaggcctggagccatgctggtggagcgttcgaaggattttgga
cgaagctggaaagtttttcgctactttgcagacgattgttcccttcatttcccttcagtt
cctgcagaacctgccagcttccttgacgatgttgtctgtgacagcagatactctggacca
gaaccatccacaggtggggaggtggtgctaaaagctctggatcctgtctttgaaatcgat
gacccatatgctccagacattcaagagctgatcaccttgacgaatatccgggtgaacttc
actcgtctcttcacgctgggcgacacgctgctggctcgcagacgcagaaatcctcaggag
aaatattactactcgctttacagcatggtggttcagggaagctgcttctgcaacggacat
gccagccgctgtgtccctgtggacgggggacgtggggacgtcttcacccagtctggcatg
gttcacggtcgatgtgtctgtcagcacaacacagctggggagaactgtgagagatgtcag
ccgtttcacaatgacgccccctggaagcctggaggagaaactgcacccaacatctgcagg
aggtgtaactgtcacggtcactcagactcgtgtcactttgatgctgctcgcttcgaagag
actggaggtacaagtggtggcgtgtgtgacgactgccgccatgacaggacggggcctcag
tgcgagcgctgtcgacctttcctgtatcaggacccgcagagggcgctagaggacccccac
gcctgcataccgtgtgactgcgaccccgccggctcccacagcggcggtttgtgtgatgct
tccagcggtcggtgtttctgtaaggaaaacgtggagggtcaacgctgcgatcgctgcaaa
catggcttcttcaatttgagatcggacaacccggctggatgtgaagcctgcaggtgccac
ggtttgggaagtgttggaccatgcaatccgcttacagggagatgtaaatgtgagccaatg
gccaccgggccgctgtgtgatcaatgtgtggcaggtttctggggtttgggaaactctgtg
ttcaaatgttcaccctgtgactgtgatgttggcggatctagcagcaacatgtgttctcca
gaggatggacagtgttcctgtttacccaacatggtgggccggcgctgctctgaccctgca
cctggtcacttcctgccttcgctcatctacttcctgtatgaggcggaactcgctgcgcag
ctgacaggaggaagttcctccccttctcctcctgctcctcttcctgctttcccctcttcc
tctccactggtgaatcctggccttttgccttcatgtgagcagtattacagaagtcagggc
tatgacttccagctctctgatggaaaagttnntttgatacggaggcctcgtcatctcacc
cgccggaggagacggcagaataacacccctttgatccagggtcccctgcagatccttgcc
caccagggctcacctgaacaatcaggaactggtctgggattggtcagggtgacagagggg
gcggggcttagattcactgtggacaacctgccaacttcgatggagtaccacctggtgatc
cgctatgaatctgagtctgtcgccgattgggtggcgagagtgaacatcatcactctgtca
ccaggagatggaggctgcagtgacgaccctccaacaggaagtctgacactgatcctcccc
agaagctccagattaggtattctggattcccgcgtgtgtctgaacgccagaggtcgatac
catgtggagattttctttgacaggcagcagaggtcagacgaggctcttctgctggtcgac
tcgatgggtctggttcagagtttctattcaggccaagactcctgctcccagagtgacttt
gactctttcagtcactttcgctgcgtcgggttggacgtgtatctcggctctcaggagtca
cttccaagaatctgcgaagggctgatcaagagtctgtcggcgcgcatccacaaaggagct
gtggcctgcaggtgtaacgtctttggttctcttggatcgggatgcagtccgctggccggg
ttatgtgactgtaagcccagcgtgatcggacgttgctgcgacgcttgtgcacctctgacc
tttgggtttggacccgaaggctgtaaacgatgcgagtgcgaccctcaaggctctctgtcg
gaggcgtgtgatccgagcggaggtcagtgtgcgtgtcgccctcaggtatcgggtcgacgc
tgcgatcgatgcgagtctggattctggggattcccgctgtgtcagccttgcgattgcaac
ggcctgtcggaaacctgcgatgggcggaccggagcgtgtgtgaactgcagggagcacagc
agcgggccgcactgtgacaggtgtgtggagggttactatcgtaacccggtctccagacaa
ccctgtcagccctgcctgtgccccgatatcctgagcagcggacggttctttgcctcttcc
tgtcgatacgacccgcagtccgtcagcgtgagctgctcctgcagggagggacacgcaggt
gaacgatgtgacaggtgcggttcgggtttctacggcgacctgaggtcgccaggtgccgtc
tgcagggcgtgctcctgcaacaacaacatcgacccggacgacagcgacgcctgcgacagc
acaaccggagaatgtctccgctgcctccactacacaacgggcccacagtgccagttctgc
cagcctggtttctatggcaacgccctgcagcacacctgtagagaatgctcctgtgaccgc
cgggggaccaaggcgactctatgccccccggagagcccctgcttctgcaacagggagaca
ggacagtgtccctgcaggacgggtgtggtgggagatctctgtgatgaatgtgaggacggg
ttctggaacctggacggagcgtcgggatgtcagccctgcagctgcgacccgtctaactcc
atcagtgacgtccagcaagtggctcaggacaccagagaccaggcccaagtcctgcagcgc
cagatcagcgacaccatccaatcagtggagagagagaaaaaccaaaccagagagctcctc
caaagagtcaaacaatatctgatggatgacatggtttctccagatgacattgagaaaatg
gccaacgctgtcctgaggatccagctaccgcgatcacctgctgagatccaatcgatgatc
aatgagatcaataatcttttgaacggtgccaccaaattccaggaggacctgaagaagctg
caggatgaagccaaagcagctcaggagcttctgcagaaagcgacagaagtcaaggagcaa
actaaaaccatcaacgtcaaagacatcctcagtgaccttattgctgcagacgcagctcag
agcaacgccaacgatgacctggaggttgcaaataaggacagagacgacgccaaagaccga
atccaagaggtggaaaacaaactgagccgcaaagaggatcagctgatgaaccagcctgta
gatctgctggaggagattgaggctctgaaaaataaaacagagcagaacagagagatggca
aaagaggccagagaaactgctgagtcagcattgaccaacatttctaatgacacggagctg
caagaagttgaggagcagtttgagcttttaaagcagaagcacttgaataaaacacttgaa
gacgaagccgcagatcgactgcagaaaatcctgaaggagaccgaagatatgcagagacaa
atggaggacagactccaacagatagaaggttatcacccaaagatccagctgctgatccag
agaaagaaggagaaaatagtggaggtggccgatctgctgcagacggtggagtcacttcaa
atggaaatcgcctcaagagctgaaaattccaccgcatgttcctcataa
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integrated database retrieval system
