Poeciliopsis prolifica (blackstripe livebearer): 129365211
Help
Entry
129365211 CDS
T09758
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129365211 (msh4)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129365211 (msh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND_NTPase5
STING_LBD
Motif
Other DBs
NCBI-GeneID:
129365211
NCBI-ProteinID:
XP_054894236
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MYQNNTEEITGSETSDAGQACGRSGLKEATASGYSSSCCPESLSSALPYRSSDFHIPSSS
HAPSQPGIASGQCQNGVRVGRPASSVLMSSTDTSSVRFPGGTPRLRRTPGSTGPTGTSVS
SVSTTSGASVIVAVVEGRGLARGEIGMASIDLKCPELVLSQFADTGTYAKVITRLHILMP
MEILMPDTASEKGKWTKLFKLITENFSGVNLTAIQRKYYNEKKGLEYIQQLCAPEFGTVL
MEVQAKYYCLASAAALLKYLEFIQSSFYAAKSLKVIFKGSEQTAMIDSASAANLELVVNN
RDNRSDYTLLGVLNHTKTPGGARRLRSNILEPLLDVDTITTRLDAIQELLQNEELFFGLK
NAIGHFLDIDRLLSVLVQIPKQETAQAAESKITHVIQLKHTLDLVPQLREVLKTCSTALL
KAYSATLEDNRFDIILEQIKTVVNYDTTFLKGSLNMRTQKCYAVRPNINAFLDIARRVYT
EIVDDIAGLVNKLGEKYGFPLRTSFSTIRGFFIQMKLDGVGLPEGKLPPEFIKVTKQKNS
YGFTTADLIKMNGRCDEALREIFHMSYVVICQLLTTIHEHIHCLYKLSDTVSMLDMLLSL
ANACTISDYVRPEFTDTLAIKQGRHPILERMARQQPVSNNTYISEGSNFIIVTGPNMSGK
STYLKQVALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMLEMKEVSYI
IHNASDRSLTIIDELGRGTSAEEGIGICHSVCEFLLGLKLLIHLPGECKAAEQTKASDII
GVLKVCPVFLLCKAFTLFATHFLELCQLESLYPNVENQHMEVQHTRNRDSGAEQVVYTYL
LSRGCSEERQYGLRAAAITSLPQSIIQEAKLVACKVSQQLLAKRPTDPETQRQRAVYHLA
TRLLQTARNSRLDPESLRMYLKGLKKQYEAELQAAAPAKLSDTEEE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagaacaatacagaagagataaccggcagtgagacctcagacgctgggcaagcc
tgtggcagaagcggcctgaaggaagccaccgcctccggctactcctcgtcttgttgtcct
gaatctctctcctccgctctgccttaccgaagttcagattttcacattcccagttcaagt
catgctccatcacagccaggaattgcctcaggtcagtgccagaatggcgtcagagtggga
agaccagcctcgtcggttcttatgtcttccacagacacttcctctgttcgctttcctgga
ggaacaccaagactccggaggacaccaggatctacaggaccgacaggaacaagtgtctcg
tctgtttccacaacttctggtgcctctgtgatagtagcggtagttgaagggcgaggtttg
gccagaggagagattggcatggccagtattgatttaaaatgtccagaacttgtactttct
cagtttgcagacacagggacatatgccaaggttataaccaggcttcacatcttgatgccg
atggaaatcctgatgccagatacagccagtgagaagggaaaatggacaaaactcttcaag
ctcattacagagaatttttcaggtgtaaatctcactgcaatccagagaaagtactataat
gagaagaaagggctggagtacatacagcagctctgtgctccagaatttggcactgtacta
atggaggtgcaagcaaagtattattgcctagcatcggcagctgctttgctgaaatacttg
gagttcattcagagctcattttatgctgccaagtctctaaaagtgatctttaagggaagt
gaacagacagctatgatcgactcggcctctgcagctaacttggagttggtggttaataac
agagacaacagaagcgactatactcttttaggagtactcaaccatacgaaaacacctggt
ggagcgaggaggcttcgctccaatattctggagcctcttcttgatgtggatactataacc
acacgcttggacgccattcaggagctgctgcaaaatgaggagctctttttcggcctaaag
aatgcaataggtcatttcctggacattgaccggctgctctctgttctcgttcagattcca
aagcaggaaacggctcaagctgctgaatctaagattacgcatgtcatccagctgaaacac
acactggatctggtgccacagttaagggaggtgttaaagacgtgcagtacagctctgctg
aaggcatacagtgcaacactggaggacaaccgatttgacataatcctcgagcagatcaag
acggtggtaaattacgataccacatttttaaaaggaagcctgaatatgcggacccagaag
tgttacgcagtgcgacccaacatcaacgcgtttctcgacatcgcacgcagagtttacact
gaaattgtagacgacattgcaggtcttgtgaacaagttgggggagaaatacggctttccg
ttgcgcactagtttcagtacgatccggggattctttatccagatgaagctggatggagtg
ggcttacctgagggcaaactacccccagagttcatcaaggtcaccaagcagaagaacagc
tatggctttaccactgcagacctgattaagatgaatggtcgctgtgatgaagcgctgagg
gagatattccacatgtcttatgtggtaatatgccaacttcttacaaccatccatgagcac
atccactgcctgtacaaactttctgacactgtatccatgttggacatgttgctctcgctg
gccaatgcatgcacaatctcagactacgtgcgtccagagtttacagacaccttggccatc
aaacaaggtcgtcaccccatcttggagcgaatggcccgacagcagcctgtctcaaacaat
acctacatctcagagggcagcaacttcatcatcgtaacaggaccaaacatgagcggcaaa
tctacatacctcaaacaggttgcgctgtgtcagatcatggcccaaataggctcttttgtc
ccagcggagtatgcctctttccggattgctgatcagattttcaccagaattggtgttgat
gatgattttgaaaccaactcctctaccttcatgttggaaatgaaggaggtctcttacata
atccacaatgcaagtgacaggtcattgaccatcatagatgaattggggcgtggcactagt
gctgaagaaggcattggaatttgtcattcagtttgtgaattcctccttggcctaaagctt
ttaatacaccttcctggtgaatgtaaagcagcagaacaaacaaaggcatccgacataata
ggtgttttgaaggtgtgcccggttttccttctttgcaaggcgttcactctgtttgccaca
cactttctggagctctgtcagctagagtctctctaccctaacgtggaaaaccagcacatg
gaagttcaacacacacgcaacagagactctggtgctgagcaagtggtgtatacatatctg
ctgagtcgaggatgctccgaagaaagacaatacggtttgagagcagctgcgattacctca
cttcctcagagtataatccaagaagcgaaattggttgcctgtaaagtcagccagcagctt
ctggccaaacgtcccactgatccagaaacacagagacagagagctgtgtaccacctggca
actcgcctcttgcagactgccagaaattcaagattggatccggagagcctgcgtatgtat
ctgaaaggactgaagaagcagtatgaggcagagctgcaggctgcagccccagcaaagctc
agtgacacagaggaggaatga
DBGET
integrated database retrieval system
