Poeciliopsis prolifica (blackstripe livebearer): 129365216
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Entry
129365216 CDS
T09758
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129365216 (stxbp5b)
Membrane trafficking [BR:
pprl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129365216 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129365216 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
ANAPC4_WD40
Beta-prop_HPS5
WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
EIF3I
Synaptobrevin
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
129365216
NCBI-ProteinID:
XP_054894244
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSSSSSSATAQPGTPRENDLVQETLQSEHFQLCKTVRHGFP
YQPSSMAFDPVQKILAVGTQSGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSAL
ADDSIHLWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGSERGNIHIVNVESFTLS
GYVIMWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKSKKADYRYNYD
EAIHSVDWHHEGKQFVCSHSDGTLTTWNIRAPAKPAQIITPHGKQPKDGKKPEPCKPILK
VEYKTTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPN
DFQEPYAVVVLLEKDLVVIDLGQIGYPIFESPYPLSIHESPVTCCEYFADCPSELIPALY
SVGSRQKRQGYSKKEWPISGGNWGQGTQTYPEIIITGHADGSIKFWDASALMLQVLYKLK
TAKMFERARGKEEKPSSDIVDEDPFAIQTLFWCPESRMLCVAGVSAHVIIYRFSKQEVTT
EVVQLLEIRMQCEFSEVDSPDPGGAQTPTLPTSAASSSPQEAEPPNQLTAGVNSSDGARD
NIPCLQVRSAPLKQSPGYQVELVVQLVWVSGEPPQPITSLAVNSSFGLVVFGNSNGLAVV
DYVQKTLLLNLGISELYSPSDPCQRQPRSPRKPRQPSGDIPTASSHMSRLSSLYSQSVKK
LRSSHFRFCDSNDGSNNSEDRCKSPTSGSTSPCNSDDERKQNFIEKVKLKSRRFSKTVAN
DFAKMSRKISSSGEQKLDQEDSSRRCSPRLCKRPFGNMKNGKLTTWMIQKLNVHRTKSDP
HRYGKDNAFTRSRSSSVTSIDRESREAISSFYFCESFPRKSDSLASPCLLVGTTQGSVMM
VALSLQPGGDQKPQQPLSFASCGTLVQLKGGILTMALLDAAGTLLPPSCEAWYDPNASDE
EKEKEKTRRRRPATPPASQEGQDSQFAVLCSEKQAKVLAMPSQTSIYKHNITETSFVLRA
DVVQMAGTYCIACFCANGHIMTLSLPSLRPLLDINYLPLTDMRIARTFCFSNLGQALYMT
SPTEFQRITYSQETCDNLQEMLSELFTPVETPEAPNRGFFKGLFGGGAQSLDREDLFGET
TAGKASRSLAQHIPGPGGMEGMKGAASGVVGDLARARVALDERGQKLGELEERTAAMMAS
AESFSKHAHDMMVKYKDKKWYQL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcttgacagcggcgtcttcctcctcc
tcctcctcctcctcctcagcaactgctcagccgggtactcccagggaaaacgatctcgtc
caggagactctccagtcggaacatttccagctgtgcaagactgtgcgtcatggctttcca
tatcaaccgtcatcgatggcttttgaccccgtgcagaaaatcctggccgtcgggactcag
tccggagctttgaggctgttcggccgtgcgggcgtggagtgctactgtcagcatgagagc
ggggctgctgtcatccagctccagttcctcatcaatgagggggcgctggtgagtgcctta
gctgatgacagcatccatctgtggaacctgaggcaaaaaatcccagcgatcctgcattcg
ctcaagtttaaccgggagagaatcacatactgccacctgcccttccagagcaaatggctg
tacatcggctcagagcgaggaaacatccacatcgtcaatgtggagtccttcaccctctca
ggctatgtcatcatgtggaacaaagccatcgaattatccaccaagacacacccagggcct
gttgtgcacattagtgataaccccatggacgagggcaagcttctgattggatttgagtgc
ggagtcgtggtgttgtgggatttgaagtccaagaaagctgactaccgctacaattatgat
gaggcgattcactcggttgattggcaccacgaggggaaacagtttgtctgcagccactcc
gatggcactctgaccacgtggaatatacgcgccccggccaagcctgcacagatcatcacg
ccacatggaaagcagcctaaggatggaaaaaagccagagccgtgcaagccaatcctaaaa
gtggagtacaaaactacaagagctggggacccgttcatggttctgtccggcgggctgtcg
tacgacacagtggggaggagagcctgtttgaccgtgatgcacggaaagagcactgccgtc
ctggagatggactatccgattgtagatttcctaacactctgcgaaactccatatccaaac
gactttcaggagccttacgctgtggtggtcctcctcgagaaggatttagttgtaattgat
cttggacaaattgggtatccgatatttgagagcccctaccctctctccatccacgagtca
ccggtgacgtgttgcgagtattttgcagactgcccctctgaactcattcctgcactttac
tctgtcggcagtcggcaaaagcgacaaggctacagcaagaaggaatggcccattagtggt
ggaaactggggccaaggcacacagacttacccagagattatcatcacagggcacgccgat
ggctcaatcaaattttgggatgcttctgcattaatgcttcaggtgctgtacaagctgaag
actgccaagatgttcgagagggcccggggtaaggaggagaagccgagctccgacatcgtg
gacgaagatccgtttgccatccagaccttgttctggtgtccggagagcaggatgctgtgc
gtggctggagtttctgctcacgtcatcatttacaggttcagcaaacaggaagtcaccact
gaagttgttcagcttttggagattcggatgcagtgcgagttcagcgaggtcgactccccg
gatccggggggagcgcagacccccaccctgccaacctctgcagcttcctccagccctcag
gaggccgagcccccaaaccagctcactgcaggcgtcaattcctccgacggagctagagac
aatataccatgccttcaggtgcggagcgccccgctgaagcagtctccgggctaccaggtg
gagctggtggtccagctggtgtgggtgagcggggagccgcctcagccgatcaccagcctg
gcagtcaactcctccttcggcctggtggtgttcgggaacagcaacggtctggcggtggtg
gactacgtccagaagaccctgctgctcaacctgggcatctcggagctctacagcccgtcg
gacccctgccagaggcagccccgctccccgcggaaaccacgccagccttctggagacatt
ccaactgcttcgtctcacatgtccagactttctagcttgtattctcagtctgtgaaaaaa
ctgcgctcctctcacttccgattttgcgactccaacgacgggtctaacaactcagaggac
cgatgcaaatcacccacgtcaggatctacctcaccctgcaattcagacgatgaacgaaaa
cagaacttcatagagaaggtgaagttaaaaagcagacgcttttccaagacggttgccaat
gactttgccaagatgtcgcggaaaattagctcgtctggtgagcaaaagctagatcaggag
gattcctcccgccggtgttcccctcggttgtgtaaacggccatttggtaatatgaaaaat
ggcaagctgacgacctggatgatccagaagttgaatgtgcatagaactaagtcagacccg
caccgatatgggaaggataacgcattcacccgctcgcgtagctcaagcgtgaccagcata
gacagagaatctcgagaggccatctcctccttttacttctgcgagagtttccccaggaag
tcggacagcctggccagcccctgtctgctggtggggaccacgcagggctccgtgatgatg
gtggccctcagcctgcagccgggcggcgaccagaagccccagcagccgctcagctttgcc
tcctgcggcaccttggtccaactcaaaggaggcatcctgaccatggccctgctggatgct
gcaggaactctgctgcccccttcctgcgaggcgtggtacgaccccaacgcctcggacgaa
gagaaagagaaagagaagacccggaggcgcaggccggccacgcctccagcctcacaggaa
ggccaggactcccagtttgctgtgctgtgttcggagaagcaggccaaggttttggccatg
ccgtcccaaaccagcatctacaaacacaacatcaccgagacctcgtttgtgctgcgcgcc
gacgtggtgcagatggccgggacttactgcatcgcctgtttctgtgccaacggccacatt
atgaccctgagcttgcccagcctgcggcctctgctggacatcaactacttgccgctcaca
gatatgcggatagccagaacgttttgcttctctaacttgggccaagctctgtacatgacc
tcccccaccgagttccagaggatcacctacagccaggagacgtgcgacaaccttcaggaa
atgctcagcgagttatttacccccgtggagacgccggaggctccgaacagaggctttttc
aaaggcctttttggcggaggagctcagtctttggacagggaagacctcttcggcgaaacg
acggccggcaaggcctcgcgtagcctggcccagcacatcccgggcccaggcggcatggag
ggcatgaagggcgcggcgtccggggtggtgggcgacctcgcccgtgcccgggtggcgctg
gacgagagagggcagaaactgggagaactggaggagaggacggcagccatgatggccagc
gcggagtccttctcgaaacacgcccacgacatgatggtgaagtacaaagataaaaagtgg
taccagctctga
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integrated database retrieval system
