Poeciliopsis prolifica (blackstripe livebearer): 129365224
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Entry
129365224 CDS
T09758
Name
(RefSeq) histone deacetylase 1-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03082
ATP-dependent chromatin remodeling
pprl03083
Polycomb repressive complex
pprl04110
Cell cycle
pprl04330
Notch signaling pathway
pprl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129365224
03083 Polycomb repressive complex
129365224
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129365224
04350 TGF-beta signaling pathway
129365224
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129365224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129365224
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129365224
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
129365224
HDAC complexes
Sin3A-HDAC complex
129365224
BRAF-HDAC complex
129365224
REST complex
129365224
SHIP complex
129365224
MiDAC complex
129365224
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
129365224
Heterochromatin formation proteins
Other heterochromatin formation proteins
129365224
Chromatin remodeling factors
NuRD complex
129365224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
129365224
NCBI-ProteinID:
XP_054894268
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MAFTAQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIRFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLG
GGGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPNKRISIRAHDKRIACEEEF
SDSEDEGEGGRRNAASYKKAKRTKTEGEKETEEKKKSTEETKEVKEEEKVPEEEKMDTSK
PNEEPKTP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaccgcccaaggcacaaagaaaaaagtttgctactactatgatggtgatgtt
ggaaattactactatggccagggccatcccatgaagcctcaccgaatccgcatgacccac
aacctactgctcaactatgggctctacagaaagatggagatctatcgtccacacaaagcc
agcggagaagagatgaccaagtatcacagtgatgattacatccggttcttgcgctccatc
aggccagacaacatgtcagaatacagcaaacagatgcagagatttaatgtgggtgaggac
tgtccggtcttcgatggcttgtttgagttctgccagctctcagcagggggctccgtcgcc
ggtgccgtgaagttgaacaaacagcagacggacatcgcgatcaactgggccggagggctt
catcacgccaaaaagtctgaagcctctgggttttgctacgtcaacgacattgtcctggct
atcctggagttattgaaataccatcagagagttctgtatatagatattgacatccaccat
ggagacggtgtggaggaggctttctacaccacagatcgtgtcatgactgtgtccttccac
aagtatggagagtacttcccaggcaccggtgacctcagggatattggtgctggaaagggt
aaatattatgctgtaaattatccactgagggatgggattgatgatgagtcctatgaagcc
attttcaagcctatcatggcgaaggtgatggagatgtaccagcccagtgctgtggtcctc
cagtgcggagctgactctctatcaggggacagactgggctgcttcaaccttaccattaaa
ggccatgcaaagtgtgtggagtacattaagagcttcaacctgccgctgctgatgctggga
ggaggcggctatacgatccggaacgtggctcgttgctggacgtttgagactgcagtggcc
cttgacagctccatccccaatgagctcccatacaatgactactttgagtattttggacca
gacttcaagttgcacatcagcccctccaacatgaccaatcagaacacaaacgactacctg
gagaagatcaagcagcgcttgtttgagaacctccgcatgttgcctcacgcccccggagtc
cagatgcaagccatcccagaggacgccgtgcaggaggacagtggcgacgaagaggacgat
ccaaacaaacgcatatctattcgtgctcacgacaaaaggatagcgtgcgaagaagagttc
tcggactcagaggatgaaggcgaaggcggtcgcaggaatgcagccagctacaagaaagcc
aaaaggaccaagaccgaaggagagaaggagacagaggagaagaagaaaagtacagaggaa
acaaaagaagtaaaagaagaggagaaggtaccagaggaggaaaaaatggacacatcaaag
ccaaatgaggaacccaagacaccttga
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