Poeciliopsis prolifica (blackstripe livebearer): 129365506
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Entry
129365506 CDS
T09758
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04020
Calcium signaling pathway
pprl04080
Neuroactive ligand-receptor interaction
pprl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129365506 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129365506 (grin3ba)
04082 Neuroactive ligand signaling
129365506 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129365506 (grin3ba)
Ion channels [BR:
pprl04040
]
Ligand-gated channels
Glutamate (ionotropic)
129365506 (grin3ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
MS_N
Motif
Other DBs
NCBI-GeneID:
129365506
NCBI-ProteinID:
XP_054894712
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MVPLSGLWSRCLAPGRARHLFISVRVLPLLLLLLLTPFSSAETCFPHPAPCHILARIGHS
VRLGALLPTRQPARIQNALNRALASIRHQSGGTDSTTASAQPAPLLPYNLTLEMVVRSPA
GWDPESLSHSACQDLVIRGVTAVLAFPHSREELIQVEFLSSFLEIPFVSILEDTEPLVTK
NRFHLQMSARVPPSTLGSLLLAVLQSGDGDRDRGSRGEGRWGGAAVICPGWDEGSDGLLT
HLQRHSGPAWHLWDIINLTLITGGKERRGEASEERREDQMEEEALNIISSSFLRSPSPIS
SVLLMGSDPECLSSVLRAAQRLAPVLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRK
PISFYIRDALQLVGRAVTTATMVKPELALVQNLVNCYDKPNRHELPSSGQYLSRFLSNIS
FAGSTGLIQVDADVSRVLSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVG
GLGNSQGQGLGAGVRGGDGQGDGYFGGHWRPGLSVEGHRLRVVTLVEHPFVFTREVDEDG
LCPAGQLCLDPKTNRTDVINGLFNQLHNPNSTVTDWEGIDLPADLRKCCYGYCIDLLEKL
AEDMGFTFDLYIVGDGKYGALSGTGRWTGLVGDLLNGTADMAVTSFSINSARSRVIDFTS
PFYSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPH
GRNRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAA
VMVGEKTFEQVSGIHDDKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHDYMRRFNQPTTP
EGVHMLKTDPPALDAFIMDKALLDFEVSIDADCKLLTVGKPFAIEGYGIGLPQGSPLTRN
VSEFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGAL
LTLAGEHTFYHLVVPRLRRSNTLQYWLHTSQKIHRALNTTYEDVGKELTGLDQKPSSCIS
ENCTLHRKQHQPSPPSPPTSLPASTTAGETGSSSPSHEPKEKRVHFDLDTLHSYRLRTHT
ASVRGRPGMVGRPGLGLGGFGFGSLGSFTSPPQINLHVNGGPVSTLTSTGLVLSPLGNRA
TQTSLWEGELQELQVKIETFRNQLREALARRAEIQTSLDRERSGLVRRDTSLDRERDRQR
VQTINTDRSSSTLSKLPERDRTSQLQTLNNQQTGRPSQTAGAGTAGLGRTSQLNTVNSLD
RGRATQSRPVVTVTGERTVQSRTSSLERSQVNQQGAGNITVQTRNASSLDRQKANLSRTL
NTLERTKANQSSVSSGT
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctctttctggactctggagccgctgcctcgccccggggagagcccgtcacctt
ttcatctctgtcagagtgctcccgctgctgcttctgctcctgctgactcccttctcctct
gccgagacctgcttccctcacccggcgccctgtcacatcttggcacggatcggacacagc
gtgcgcctcggtgcgctcctgccgacccgccagccggcgcggatacagaacgcgctcaac
cgcgccctggcgagtatccggcaccagagcggcgggacggactccaccaccgcttccgca
cagccggcccctctgctgccctacaacctgaccctggagatggtggtgcggtcgccggcg
gggtgggacccggagtcgttgtcccacagcgcctgtcaggaccttgtgatcagaggcgtg
acagccgtgctcgcctttccacactccagggaggagctgatccaggtggagttcctctcc
tctttcttggagattcctttcgtgtccatcctggaggacacggaaccccttgtgactaag
aaccggtttcacctccaaatgtcggcccgtgtacctccttcaacccttggcagcctgctg
ctggcggtcctgcagagtggggacggggacagggacagagggagccgaggagaaggcaga
tggggaggagcagctgtgatctgccctggatgggatgaaggcagcgacggcttgctgact
cacctgcagaggcacagcggtcctgcttggcatttgtgggatatcatcaacctgacgctc
atcaccggcggcaaagagagaaggggggaggccagcgaggagaggagggaggatcaaatg
gaagaagaggctttgaacatcatctcttccagtttcctgcgctccccctcgccgatctcc
tccgtgcttctcatgggatctgacccggagtgtctctcatctgtcctgcgagccgctcag
cgccttgccccggtacttccagcgctgcagtggatcatgggatatcctttgtcccctgat
tcactgcacactctgggaggtccccttggactgctggcctatggggaggtgggacgcaag
ccgataagcttctacatacgggacgccctccagctggtaggccgagcagtcactacggcc
accatggtgaagccggagttggcgctggttcagaatttggtgaactgttacgacaaacca
aacaggcatgaactgccgtcttctggacagtatctttccaggtttctgtccaacatctct
ttcgctggctctacgggactgatccaagtggatgctgatgtttctcgagtcctttcctcc
caactgttccacgtatggagtcttaaaagaggtgcgctgggtcagccagcgtgggttact
gtaggacagtggacgcgtggtcgactagaacttgagggaggcattttgggactggtggga
gggctcggcaacagccagggacaaggccttggagctggtgtcagaggaggggatggtcaa
ggggatggctattttggaggacactggagaccaggactttccgtcgagggacaccgcctc
cgtgtggtgacgttggttgaacatccatttgtcttcacaagggaggtcgatgaggatggg
ttgtgtccagcaggtcaactttgtctggatcctaaaaccaatcggactgatgtaatcaat
ggcctcttcaaccagcttcacaaccccaactctacagtgacagactgggaaggaattgat
ttgcctgcggatctaaggaaatgctgctatgggtactgcattgacttgttggagaaactg
gcagaggatatgggatttacctttgacctttacattgtgggagatggaaagtatggcgcg
ttgagcgggacgggacgctggactggccttgtgggggacctcttgaatggaacagctgac
atggccgtcacctctttctccatcaactctgccaggagcagagtgatagatttcacttct
cccttttactccaccagtctgggaattctggttcgtagccgggacacggcagcacccatt
ggagccttcatgtggccgctccactggtccatgtgggtgggcatttttgttacgttgcac
ctcacagcgctcttcctcaccttgtatgagtggaacagcccatttggcatgaccccccat
ggcagaaacaggctgcgtgtgttctcctactcgtctgccctcaatctctgctacgcaata
ctcttcggacgcaccgtcgccaccaagactcccaaatgctggacgggacgcttcttgatg
aacctctgggctattttctgcttactggtgctgtcaagctacacagccaaccttgctgct
gttatggttggagagaaaaccttcgagcaggtttcaggaattcatgacgacaagctgcac
catccctctctgggcttccgctttgggacggtgagggagagcagcgccgaggactacatg
aagaagagtttcccagagatgcatgactacatgagacgtttcaaccagcccacaacgcca
gagggtgtgcacatgctaaagacagatcctccggctctggatgcattcatcatggataaa
gccctgctcgactttgaggtctccattgatgcagactgcaagctgctcacagtggggaag
cctttcgccattgaaggctacggcataggccttccccagggctctcctctgacccgcaat
gtgtcagagtttgtgagtcgctacaagtctgacggcttcatggacatgctgcatgacaaa
tggtataaggttgtaccctgcggaaagagagtctttgcagtcactgagactctgcagatg
ggcatccagcatttttcaggtctgtttgtgttgctgtgcatgggtgtcggcggagctctg
ctgaccttggcaggtgaacacaccttctatcacctggtggtcccccgcctccggcgctcc
aacaccctgcagtactggctgcacaccagccagaaaatccacagagcgctcaacactaca
tatgaggatgtcgggaaggagctgaccggccttgaccaaaagccctcctcttgtatctca
gaaaactgtaccttacacaggaaacagcatcagccttctccgccgtcccctcccacatcc
ctccctgcttccaccacagctggtgaaaccggaagctcctcgccgtctcatgaacccaag
gagaaacgcgtacactttgacctggacacgcttcacagctaccgcttgcgcacgcacaca
gcgtcggtgcgtggtcggccgggcatggtcggccgtcctggcctcggtctgggagggttt
ggttttggcagcctgggcagctttacctccccgcctcagatcaatctccatgtcaatgga
ggtccggtctctacccttacgtccacaggtttggtcctctctcccctgggaaatagggct
actcagaccagcctgtgggagggggaactgcaggagcttcaggtgaagatcgagaccttc
cgcaaccagctgagagaagctctggctcgaagagctgagatccagaccagcctggacaga
gagaggagcgggctggtacgaagggacaccagtctggacagggagagagacagacagagg
gtccagactatcaacacagacagaagcagttccaccctgtccaaactcccagaaagagac
aggaccagccaactgcaaaccttgaacaatcagcagacaggaaggcccagccagacagct
ggggctggtaccgcggggcttggacggaccagccaattaaacacagtgaacagtttggac
agaggaagagccactcaatcacgccccgtcgtcactgtgacaggagaaaggactgtccag
tcccgcacttcgagtttggagcgaagtcaagttaaccaacaaggtgctgggaacataact
gtccagacaaggaacgcttctagcctggacagacagaaggccaacctatcacgcactctg
aacactttggagaggacaaaagccaaccagtcaagtgtaagcagtggaacctga
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