Poeciliopsis prolifica (blackstripe livebearer): 129365514
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Entry
129365514 CDS
T09758
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129365514 (pnn)
03015 mRNA surveillance pathway
129365514 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129365514 (pnn)
03041 Spliceosome [BR:
pprl03041
]
129365514 (pnn)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129365514 (pnn)
Spliceosome [BR:
pprl03041
]
Complex C
Other components
EJC/TREX
129365514 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
129365514
NCBI-ProteinID:
XP_054894729
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQLRRLSGPMVGLGGGRGRGI
NLLRRSLSDMGSSGPPAKQRDIEGALLRLAGDQRARRDVRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSSEKLKRRSEIEQK
LEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWNCHNNHLVKYIRTK
TKPHIFYRPGKMCSATQKLLEESTKKLNAVFEERREAFAEHLSKMESRPRRQPNRDQDGN
SASRMDRPAEGKPAGQVEKRRGKRGESRREEDEDEDEDDEEEREKEMGGGDAEEGEKEGL
VKIEEVEEDVMEVREEGSKEEAGEEQKDKSEKAASPESEEMEVEKEDKDKEEEVGTDRKQ
ESTEIQAEKTPDVQSCEAAVSSLEVPDSNDEPPQSLAAGEPPAQSPGTETASPSQEPQTA
FAGPAHDPTSATQGNMAPESSVQDSTAENQTEERKSKEDEEEGSNKLPDSKGVDAPAKEE
GEQQGRGRKKEKDGKKRRSRSKSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSTSSSR
SRDGGKRKRRPSDRGRDKKKEEKSRQKSGGRDSAERKKRRSEEKKGRPSRSDREHKDRGD
RKDKRR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtgcggagcctgcaggaccagctcgaaaaagccaaagaaagcttgaaa
aatgtggacgataatattcgtaaactgaccggacgggaccctaatgaatcacgaccgggt
cagctgcgtcggctcagtggccccatggtaggcctgggaggaggtagaggaagaggaatc
aatctgctcagacgcagtctctctgatatgggcagcagcgggccccctgccaagcaaagg
gacatcgaaggagctctgctgaggctggcaggtgatcagagggccaggagagacgtgcgt
catgacagtgacgccgaggacgatgacgatgtcaaaaaaccggcgttgcagtcatctgta
gtagctacctccaaggagagaacacgccgagacctcattcaggatcaaaccatggatgaa
aaggggaaacagaggaatcggcgcatgtttggcctgctgatggggacactgcagaaattc
aaacaagaatcgaacgtctcatctgagaagctaaagcgacgttcagagatagagcagaag
ctcgaggttcaagctgaggctgagaggaaaaaagtagagaatgaaaagcgagaactgttc
gaggagagaagagccaagcagacagagctgagactgctggaacagaaagtagaattagct
cagctgcaagaggagtggaactgccacaataatcacctggtgaaatacattcgcaccaaa
accaagcctcatattttctaccggcctggaaaaatgtgctccgcaactcagaaactcctc
gaagaatccaccaagaaactcaatgctgtgtttgaggaaaggcgtgaggcatttgccgaa
catttgagcaagatggagtcgcgtccccggcgccagccgaaccgcgaccaggatggcaac
tcagcctcaaggatggaccgcccggcggagggtaagccagcaggtcaggtagagaagcgg
agaggtaaaaggggggaatccaggagggaggaagacgaggatgaggatgaggacgacgag
gaggaaagggagaaggagatgggagggggcgatgctgaggagggggagaaggaggggttg
gttaaaatagaagaggtagaggaggatgtgatggaggtgagagaggagggaagcaaggag
gaggcaggagaggagcagaaggacaagagtgagaaggcagcaagtccagagtcagaggag
atggaggtagagaaggaagacaaggataaggaggaagaggtaggaacagacaggaagcag
gagtccacagaaatccaagcagaaaagactccagacgttcagagctgtgaagcagctgtt
agtagcctcgaagtcccagactccaacgacgagcccccacagagcctcgctgcgggagaa
ccaccagcacagtcacccgggacggagaccgcctctccaagtcaagaaccccaaacggcc
tttgctggccctgctcacgatccaaccagtgccacacagggcaacatggctccagagtcc
agcgtccaggactccacagcggaaaaccagacagaggagagaaaatcaaaggaggatgaa
gaggagggctcaaacaagctgcctgattctaagggggttgatgcccctgcaaaggaggaa
ggagagcaacaaggcagaggaagaaagaaggagaaagacggaaagaaacgtcgcagtcgt
agcaaaagctcctcttcctcgtccgggtcctcctccagtggtagctcctcctcatcctcc
ggatccagccgatcttcgtcatcgtcttcgtcttcatcgtcctcgacgtccagcagccgc
agccgagacggcggcaagcgaaagaggaggccgtccgatagaggcagagacaagaagaag
gaggagaaaagtcgacagaagtcaggagggagagactcggcggagaggaagaagagaagg
agcgaggaaaagaagggcaggccgtcccggagtgacagggagcataaagatagaggagac
aggaaggacaagagacgctga
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