Poeciliopsis prolifica (blackstripe livebearer): 129365585
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Entry
129365585 CDS
T09758
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03082
ATP-dependent chromatin remodeling
pprl03083
Polycomb repressive complex
pprl04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129365585
03083 Polycomb repressive complex
129365585
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
129365585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129365585
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
129365585
Histone modification proteins
HAT complexes
HATB complex
129365585
HDAC complexes
Sin3A-HDAC complex
129365585
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
129365585
PRC2.2
129365585
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
129365585
Heterochromatin formation proteins
Other heterochromatin formation proteins
129365585
Chromatin remodeling factors
NuRD complex
129365585
NuRF complex
129365585
NuRF complex (fruit fly)
129365585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
CAF1C_H4-bd
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_Aladin
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
eIF2A
ASA1
Beta-prop_IFT140_1st
MIOS_WD40
CFAP251_N
Beta-prop_SPT8
PAC11
Beta-prop_WDR41
NBCH_WD40
Beta-prop_VPS8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129365585
NCBI-ProteinID:
XP_054894846
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaagacgctgcatttgatgatgccgtggaggaaagggtgatcaatgaagag
tacaagatctggaagaagaatacccctttcctctatgatctggtcatgactcacgccctg
gagtggcccagcctgaccgctcagtggctgccagatgtcaccagacccgagggaaaggac
tacagcgtgcatagactggttttggggacacacacctctgacgagcagaatcatcttgtt
attgccagtgttcagcttccaaatgatgatgcccagtttgatgcttcacactatgacagt
gagaaaggagagtttggaggctttggctctgttagtggaaaaatagagattgagatcaag
atcaaccatgagggagaagtgaacagagcgcgctatatgcctcagaatccctgtattatt
gccaccaaaacccccaccagtgatgtgctggtctttgattacacaaagcacccctccaaa
cctgatccttctggagaatgcaccccagacctgcgactcaggggacaccagaaggaaggc
tatggcctctcctggaacccaaacctcagcggatgcctcctcagtgcttctgatgaccat
actatatgcctttgggatatcagcacggtgccaaaggaggggaagatcgtagatgccaaa
acaatcttcacaggccacactgctgtagtggaggacgtttcctggcatcttctccatgag
tccctcttcggatctgtggcagacgaccagaaactcatgatctgggacacacggtcaaac
aacacctccaaaccgagccatgcagtggacgctcacactgctgaagtcaactgcctgtct
tttaatccctacagcgagttcattttggccactggctctgctgacaagactgtggctctt
tgggacttgaggaacctgaagctgaaactccattcatttgagtctcacaaggatgagatc
ttccaggttcagtggtctcctcataatgagacgatcctggcctccagcggcaccgacagg
cggctcaacgtctgggatctaagtaagatcggagaggagcagtcgccagaggacgctgag
gacggccctcccgagttgctgttcatccatggcggacacacagctaagatctcagacttt
tcctggaaccccaacgagccgtgggtaatctgttcagtgtcagaggacaacatcatgcaa
gtgtggcagatggctgaaaacatctacaacgatgaagacccagaaggtgctgcagattca
gaggtccaggcataa
DBGET
integrated database retrieval system
