KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129365619
Entry
129365619         CDS       T09758                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pprl04121]
    129365619 (hltf)
   03400 DNA repair and recombination proteins [BR:pprl03400]
    129365619 (hltf)
Enzymes [BR:pprl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129365619 (hltf)
Ubiquitin system [BR:pprl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129365619 (hltf)
DNA repair and recombination proteins [BR:pprl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    129365619 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-RING_2 DEAD ResIII RING_XB3-XBAT31 zf-C3HC4_4 Prok-RING_4 zf-Nse zf-rbx1 zf-ANAPC11 zf-RING_6 zf-RING_4
Other DBs
NCBI-GeneID: 129365619
NCBI-ProteinID: XP_054894909
LinkDB
Position
Unknown
AA seq 961 aa
MFSRWWKFGRGGLTDVDLFSDGSESAAETLSQAIRAAGSREPDADGSVLFGQLRGTVVGL
RYYTGVVNRGEMVGLVREPHNPYDKNAVMVTNVLGRQVGHIRKELAAAMAHVMDNNLAKV
EGVVYSGTNNSFSMPVTLSFLGSEENRDAVVKHMASRGFKLDADGGGAAGAKGRSFGSPA
SLFSFKKGVTIPLTAEELKNAFDNLFEGLMQSKDGEKEAAESVATPLLPHQKQALSWMCA
RENKDMLPPFWEKRGDLYYNSLTCFSAKEIPERVRGGILADDMGLGKTLTTIALILTNFH
KGKPLPVERCDGPISPTKAKNKSLEGFKLQGSSSEVHSAGESSHCSAIPKEDVIDAADVA
LVEDEPQKSISKEKHKPTKRKASKEGPVLLEDLDFAAALSCATSETTPKKKKTTEKSKLK
QSVEMSVSESTDDLSAKATLIVCPLSVLSNWLDQFEQHLRSNVKLNIYLYYGSERNRSKT
FLSSQDVVITTYNVLSTDFGNKSPLHGINWLRVVLDEGHIIRNPNAQMSKAVLELKAQRR
WILSGTPIQNSVKDLWMLLAFLRLKPFDVREWWNRVIQRPVIQGDRAGLQNLQNLVKCIT
LRRTKSSEVNGRRLVSLPKKTVYVEQVELSPQEREEYELARNEGKRTIGRYVAEGSVLRN
YADVLAILMRLRQYCCHPDLIGKIDADLATADTPAELRQWLMEKMRLVLASGSDEECSVC
LDSIRMPVITHCAHVFCRPCIAQVISSEQKARCPLCRSEIKTSELVEFPPEEIEDEKSVN
SDRWRTSSKVQALMGNLLRLRSEDDNVKCLVVSQFTRFLTVLQTPLREHGFSFVRLDGTM
SQKKRTQIIQEFQSSAADSPKILLLSLKAGGVGLNLTAASRVFLMDPAWNPAAEEQCIDR
CHRLGQERNVVVTKFIVKDSVEENMVKIQKKKQDMVEKAFGSTNTDRKTSRIDDIRALLE
V
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgttttcccgctggtggaagtttgggagaggcggactcaccgacgtggacctcttctcg
gacggctctgagtccgctgcagagactctgtcccaggccatccgagctgctggctcccgg
gagccggatgcggatggcagcgtgttgtttggccagctgcggggcaccgtggtcgggctc
agatattacactggtgtggtgaaccgaggggagatggtgggtttagtacgggagcctcat
aatccgtacgacaagaacgcggtgatggtcaccaacgtgctcggcagacaggtgggacac
atcaggaaggagctggctgcagccatggcgcatgttatggacaacaacttggctaaagta
gagggggtggtgtactcagggaccaacaacagcttctccatgccggtcacgctgtcgttc
ttggggagcgaggagaacagggacgctgtggtgaagcacatggcgagtcgagggttcaaa
ctggatgcagacggaggcggagctgcaggcgcaaagggaagatcttttggcagcccggct
tctttgttttccttcaagaaaggcgtgaccatcccactgactgcagaggagttaaagaat
gcctttgataacttatttgagggtttgatgcagagcaaagatggggagaaagaagcagcc
gagtctgtggccacgccgctgctgcctcaccagaagcaggcgctgtcctggatgtgcgct
cgggaaaataaagacatgctgccgccgttctgggagaagcgaggcgacctgtactacaac
agcctcacgtgtttctccgccaaagaaataccagagcgagttcggggaggaatactggct
gatgacatggggctgggtaaaacactgacaaccatcgctctgatccttaccaacttccac
aaagggaaacccttgcctgtggagagatgtgatgggccaatttcacctaccaaagctaag
aataagtctctggaaggctttaaacttcaagggagcagcagtgaagttcattcagcagga
gaaagttcccactgctctgccattcccaaggaggacgtgatcgacgcagcagacgtagcg
ctggtagaagatgagcctcagaaaagcatcagcaaagagaagcacaaacccactaagcgc
aaagccagcaaagagggtccagtgttacttgaggatctggactttgctgctgccttgagt
tgcgcgacgtcggaaaccacgccaaagaagaagaaaacaacagagaagagcaaacttaaa
cagagtgtggagatgtctgtctctgaaagcacagatgacttatcagcgaaggcaactctc
atcgtctgtcctctctctgtgctcagcaactggctggaccagttcgagcagcacctccgg
tccaatgtgaagctcaacatctatctgtactacggttctgagcgcaacaggagcaagacc
tttctgtcctctcaggatgtggtgatcaccacctacaacgtcctctcgaccgactttggg
aataagagtcctttacatgggatcaattggctgagggtggttctggatgaagggcacatc
atcagaaacccaaacgcacagatgagcaaagccgtgctcgagctgaaagctcagagacgt
tggattctttcaggcactcccatccagaacagcgtgaaggacttgtggatgctgcttgcc
ttcttgcgtctgaagcccttcgatgtgagggagtggtggaaccgggtcatccagaggccc
gtcatacaaggggacagagccggcctgcagaacctccagaacctggtgaagtgcatcacc
ctgaggcgaaccaagagcagcgaggtaaacggacgccgcctggtgtcgctgcccaagaag
acggtttacgtggagcaggtggagctcagcccgcaggagagggaggagtacgagctggcg
cgcaacgagggaaaacgcaccatcggcagatatgtagccgaagggtccgtgttgaggaat
tacgccgacgttctcgccatcttgatgcggctaagacagtactgctgccaccctgatctg
atcgggaaaatagacgcagatttagccacagcagacactccagcggagctgcggcagtgg
ctgatggagaaaatgcggctggtgttggccagcggatcggacgaggagtgctccgtgtgt
ctggactccatccgaatgcccgtcatcacccactgcgcccacgtgttctgccggccgtgc
atcgcacaagtcatcagcagtgagcagaaggcccgatgtcctctctgtcgaagcgaaatc
aagaccagtgagctggtggagtttcctccagaggagatagaagatgagaaaagcgtgaac
tctgacaggtggaggacaagctcaaaggttcaggcgctgatgggaaacctgctccggctg
cggtccgaggacgacaacgtcaagtgtctggtcgtttctcagttcacgcgcttcctcacc
gtccttcagacgccgctcagggaacacggttttagctttgtgcgtctggacggcacgatg
agccagaagaagagaactcagatcatccaggagtttcagagctctgcggcggacagcccc
aaaatcttgcttctgtcgctgaaggccggaggggtgggactgaacctgaccgcagcgtct
cgtgttttcctcatggatccagcttggaacccggcggctgaagagcagtgtattgatcgc
tgccaccgtttaggccaggagagaaatgttgtcgtcaccaagttcattgtgaaggattcg
gtggaggagaacatggtgaagatccagaagaagaagcaggacatggtggagaaggctttt
ggctcaaccaataccgacaggaaaacgtctcggatcgatgacatcagagctctgttggag
gtgtag

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