Poeciliopsis prolifica (blackstripe livebearer): 129365692
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Entry
129365692 CDS
T09758
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129365692 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129365692 (smarca2)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129365692 (smarca2)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129365692 (smarca2)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129365692 (smarca2)
Chromatin remodeling factors
BAF complex
129365692 (smarca2)
PBAF complex
129365692 (smarca2)
GBAF(ncBAF) complex
129365692 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
129365692
NCBI-ProteinID:
XP_054895038
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QAQGQSDYSQDNMYPMHKPMEAAMNDKTMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQH
SQGYMSPHPSPMGIHEHASSPMSGGGGGPTPPHMPPSQPGPMMSMDPQGGMASMSGMGQP
GRGPSSFSPVQLQQLRAQILAYKILARGQPLPENLQLAVQGKRSLPTMQQQQQAPLPPQQ
QQPQPQQPQQPQQQQQPQQQQQQQASGASPYRPSGMSMAPMSGPQSSPCPTPALQGHNQS
TGPKPWTDGQASDNQAQKHLTPVPSGRPSPAPPQAPVGAPGPVPGGSGAGHPSGQQVSPM
LQMQQKQNRITPVQKPQGLDPVGILQEREFRLQARIAHRIQELESLPGSLPPDLRTKATV
ELKALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKL
EQEKKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTRAVATWHTNTEREQKKETERL
EKERMKKLLEEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKR
RKTKKKKVEGDGEGTSAIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEA
WLEMNPGYEVAPRSDSEESGSEFEEEDEEEMGKAETEEKKKIDPNKEAENDAKNVIESAK
QDVDDEYSVPTGQTSSQSYYGVAHAVIEKVEKQSSLLINGMLKQYQIQGLEWMVSLYNND
LNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKI
AYKGTPGLRRGLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCK
LTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE
RVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQRVLYRHMQ
KGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIINGH
DLYRASGKFELLDRILPKLHATGHRVLLFCQMTSLMTIMEDYFSYRNFQYLRLDGTTKSE
DRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI
GQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEH
EEQNEDEDEVPDDETLNQMIARNEDEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSW
IIKDDAEVERLTYEEEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRS
KKRKRKRRQDKDSSSRDDGGMKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGS
GRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRNHKYRSLSDLEKDVMLLCQNAQ
TFNLEGSQIYEDSIVLQSVFKSARQKIAKDEDSEDDSDEDDDDDYDSEAEAKSVRVKIKL
GREGRGHDKGKKRQSRGKAKPVVSDDDSDDDQDDNDQSDKSKSDDD
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccgtcagacacgtcaggtggcatgtcccatcctggcccatcaccaggggca
ggcctgtccccagggcccatcttgggccccagccccggacctgacccctcaccaggttct
gttcacagcatgatgggccccagtcctggaccagggacacccaatgcaccgcacggcatg
caggcccagggacaaagcgattactctcaggacaacatgtatcctatgcataagcccatg
gaggcggccatgaacgataagacgatggccgaggcgatgcacttcggacacatgaaaggt
gtcggcatgcgatccctgcacagcggcatggggcctcctcagagcccgatggaccagcac
agccaaggatacatgtctccacatccatcccccatgggaatccatgagcatgcctccagc
cccatgtccggaggtggaggcgggccgaccccgccccacatgcctccatcccagcccggc
cccatgatgtccatggaccctcagggaggcatggccagcatgtcggggatgggccagccg
gggcgcggcccctcctccttcagccccgtccagctgcagcagctcagggcgcagatcctg
gcctataagatcctggcccgcgggcagccgctgcccgagaacctccagctggctgttcag
ggcaaaaggagcctacccacgatgcaacagcagcagcaggcgccgctgccgccgcagcag
cagcagccgcaaccgcaacaaccacaacaaccacagcagcagcagcagccgcagcagcag
cagcagcagcaagcatctggtgctagtccatacaggccttcaggtatgtcgatggctccc
atgagcggcccccaatcaagcccctgcccaacaccagcactgcaaggacacaatcaaagc
accggacccaagccttggactgacggtcaagccagtgacaatcaagcacagaagcaccta
accccggtccccagtggccgcccgtctcccgctccgccccaggcgcctgtgggggccccg
ggcccagtaccggggggttcaggggccggtcacccttcagggcagcaggtgtcccccatg
ctgcaaatgcagcagaaacagaaccggatcaccccggtccagaagccccaggggttggac
ccggtgggaatcctgcaggagcgagagttcaggctgcaggcccggatcgctcatcggatc
caggagctggagagtctgcccggctctttgcctccagacctccgaactaaagcgacggtg
gagctcaaggcgctgcggctgctcaacttccagcggcagctgaggcaggatgtggtggcg
tgtatgaggcgcgacacgaccctggagacggccctcaactcgaaggcctacaggcgcagc
aagcggcagacgctcagggaggcgcgcatgacggagaagctggagaagcagcagaaactg
gagcaggagaagaagcgtcgacagaagcatcaggaatatctcaacagtattcttcaacat
gccaaggactttaaggaataccaccgctcggtgtccgggaaaatccagaaactcacccga
gccgtcgccacctggcacacaaacactgagcgcgagcagaaaaaggagacggagcggctg
gagaaggagaggatgaagaagctgctggaagaggatgaggaaggctatcgaaaactcatt
gaccagaagaaggacaagcgtctggcctacctgctgcagcagacggatgaatacgtggcc
aacctcacgactctggtgtacgaacacaaagccgctcaggctgccaaggaaaaaaagaga
aggaagacgaaaaagaagaaggtggaaggagacggtgaaggtaccagcgccattggaccg
gatggcgagcccatggatgagagcagccagatgagcgagctgccagttaaagtgatccag
acggagaccgggaaggttctgcaggggaccgatgcccccaagtccagccagctggaggct
tggctggagatgaaccctgggtatgaagtcgctccacgttcagacagcgaggaaagcggc
tcagagttcgaggaagaggacgaagaggaaatgggcaaggcggaaacggaggagaaaaag
aaaattgatcccaacaaagaggctgagaacgacgccaagaacgtcatcgagtcggccaaa
caagacgtggacgatgagtacagcgtccccactgggcagaccagctcccagtcgtactac
ggcgtggcgcacgccgtcatcgagaaggtggagaagcagtcgtctctgctgatcaacggc
atgctcaaacagtaccagatccagggtctggagtggatggtgtccctctacaacaacgac
ctgaacggcatcctggctgatgaaatgggcctggggaagaccatccagaccatcgccctc
atcacctacctgatggagcacaagaggctcaacggcccctatctcatcatcgttcctctc
tcgactttgtccaactgggtttatgaacttgacaaatgggctccttctgtggtcaaaatt
gcttacaagggaactcctggtctgcgtcggggtctcgtccctcagctccgcagcggcaag
tttaacgtcctcataacgacgtacgagtacataatcaaggacaaacacatcctggcgaag
atccgctggaagtacatgatcgtggacgagggccaccgcatgaagaaccaccactgtaag
ctgacgcaggtgctgaacacccactacgtggctccgcgccgcctgctgctcaccgggacg
ccgctgcagaacaagctgccggagctctgggccttgctcaacttcctgctgcccaccatc
tttaaaagctgcagcacctttgagcagtggttcaacgcgccgttcgccatgactggagag
agggtcgaccttaacgaggaagagaccatcctgatcatccgccgtctgcataaggtgctg
cgcccgtttctgctccgcaggctgaagaaggaggtggagtctcagctgcccgagaaagtg
gaatacgtcataaaatgcgacatgtctgcgatccagagggtgctctaccgccacatgcag
aaaggcatcctgctgaccgacggctcggagaaagacaagaagggcaaaggcggagctaag
actctgatgaacaccatcatgcagctgaagaagatctgcaaccatccatacatgttccag
cacatagaggagtcttttgctgagcacttgggttacccgaatggcatcatcaatgggcat
gatctgtacagagcttctgggaagtttgagctccttgatcggatcctgccaaagctgcat
gccactggacacagagtcctgctgttctgccagatgacgtctctgatgacaatcatggag
gattacttcagctatcgcaacttccagtatctgcgcctggatggaaccaccaaatccgag
gaccgagctgcactcctaaagaaatttaacgaggaagggtctcagtacttcatcttcctc
ctcagtaccagagccggtgggctggggctcaacctgcaggccgccgacacggtcgtcatc
tttgacagcgactggaacccgcaccaggacctgcaggcccaggatcgggctcaccgcatc
gggcagcagaacgaggtccgcgttctgcgcctctgcaccgtcaacagcgtggaagagaag
atcctggctgctgccaaatacaaactgaacgtggatcagaaagtcatccaggccggcatg
ttcgaccagaaatcctccagccacgagcgtcgcgccttcctgcaggccattttagagcac
gaggagcagaacgaggatgaagacgaggtccctgatgatgaaacgctcaaccagatgata
gcgcgtaatgaagacgaattcgatctgttcatgcgcatggacatggaccgtcggcgcgag
gacgcccggaacccgaagcgtaagcctcgtctgatggaagaagacgagctgccgtcgtgg
atcatcaaggacgacgccgaggtggagaggctcacctacgaggaagaggaggagaagatg
tttggccgagggtcgcgctgccggcgagacgtggactacagcgacacgctgaccgagaaa
cagtggctgagagccattgaggacgggaacctggaggagatggaggaggaaatccgctcg
aagaagcgtaaacgcaaacggcgtcaggacaaagactcgtccagcagagacgacggcggc
atgaaggccaagaagaggcgagggcgaccgccggccgagaagctgtcgcccaacccgccc
aaactcaccaagcagatgaacaccatcatcgacacagtcatcaactacagagacgggtca
ggcaggcagctcagtgaggtgtttgtgcagctgccgtccaggaaggagctgccagaatat
tacgagctgataagaaaacccgtcgacttcaagaagatcaaggagcgtgtgagaaaccat
aaataccggagtttgagcgaccttgagaaggacgtgatgcttctgtgtcagaacgcacaa
accttcaacctggagggatcccagatatacgaggactccattgttctccagtctgttttc
aagagtgccagacagaagattgccaaggacgaagacagcgaggatgacagtgatgaggat
gatgatgatgactatgactcagaggccgaagccaagtctgtgcgggtgaagatcaagctg
ggtcgggaaggacgtggccacgacaaaggcaagaagaggcaaagccgcggaaaggccaag
ccggtggtgagcgacgacgacagcgacgacgaccaggacgataacgatcagtcggataaa
agcaaaagcgacgacgactga
DBGET
integrated database retrieval system
