Poeciliopsis prolifica (blackstripe livebearer): 129365754
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Entry
129365754 CDS
T09758
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129365754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129365754
Membrane trafficking [BR:
pprl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129365754
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
129365754
RAVE complex
129365754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_Gbeta
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
129365754
NCBI-ProteinID:
XP_054895179
LinkDB
All DBs
Position
Unknown
AA seq
3084 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGRVNNVPFTAYASGCDVVVLGSNFERLQIIPGAKHGNIQV
GCVNCSQRGGQIAASYGSIVCVFEPVHLPDQKYTSKLSCQWQKTGQFVLESMVRNLAWHP
TDGTLLTGSGSLQLWSNADGKDESEERGKQTKPTGPDSNSTWRCIWQSKTASPVSFINFS
PDGQFFATAGQDDCLVKVWYSTDKWKSCVAELFTPPDASVSVQGELTFSFIYLAHPRSVT
GFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLISGYHSSHLFGPHGETVN
SAGSSSKHTSNGKSAGMSSQELSFQESWHSSSYRDIPQPSLTGCLPHDQNQHHNHRRTSN
SGTPHANALCHFHIAASINPATDIPLLPSISALSAVEDEEPGGLFTIHWLNNKELHFTLA
MEVFLQQLGGSLEQRNKSSNEELDDEENSDEEENRASDPQCPEGGELPVAAVEHQVDILL
EEWNKGADMLFSIHPLDGSLLVWHVDWLDEYQPGMFRQSQVSFVSRIPVAFPTGDAISLS
HSVVMYACNKNVDLAIQHGRQRPPGSSLSQTKSALISYGSLGKAAPSSSLRLSIFTPNVL
MISKHDDGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNELACHSLLPLLLTTSHH
NALRTPEADGILAPAETYSTGVPAFSHGSRPSRLSLGGVSQDPNAIYSELILWRVDPVGP
LSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGQSLRLYQA
VIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDAITDFRGKETQLLHVFEE
DLILGSMKTEDTQDTPSTATCSKPAFSGDFFLVVVELTPTGRSLLHMWHLHLAACPVIIE
EATIQKEINAVSSISGSQFIFDIPSSPVQKSKPCTSNLQSACRLSLTTHMLCSQEMALPQ
GVEVISVTPSAGHLSASCSLPSGRVPYLLATSCSDGKVRFWRCTALKMDQSSVHSLVYQW
EEWPLLVEETHSSSSAVSVPGRPIKVSCCHSGRIAVAYRQTTDPPLNSTPHLNTHNLLQF
PPALVSSPFCSNTHVTPTLTQQPCQSLALSPNPANTKEPAVHISTFQCESTGGSQWILEQ
TIVLESTDPTTFSSTTDGRANIPNNADFSTLNGNCPGSANRSQVHLDWVSQEDGSHVLTV
GIGTKIYMYGRLSGKPPDLGLSSQTNRDQSLSRLVLLRSVNLVSSVEGSLPIPVSLSWVR
DGILVVGMDCEMHVYSQWQPPVPPKPSITVVQDADISSSVSSIVSAVRQCQEDVFTTGAP
TASLTLPKRSLTRSMMSLAQKLSGKKTVYDLPVEMEDAGLFEAAHQLSPTLPQYHPVQLL
ELLDLGKVNRAKAILSHLVKCIAGEIVVLKDNATHPEKRVRSRTISVGGSTARDQKIFNK
SESSSPDYTEISSVPPLPLYALLAADEDAPHLEKGGSMSGDSGHGSSQTDAYDELFHTHN
TLDLNPLDDEQEEPGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMAL
ADTIATTSTDLKDNQDKSKGGETLDECGLKFLLAVRLHTFLLTSLPPVHRAQLLRQGLST
CQYAWAFHSEAEEELLNMLPALQKGEPTWAELRAMGVGWWLRSTNKLRRCIEKVAKASFQ
RNNDPLDAAIFYLAMKKKAVVWGLYRSQKNTKMTEFFHNNFSEDRWRKAALKNAFSLLGK
QRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSSTYKKILQRHVLG
QDKQIPVHPDPFLRSIAFWVLEDYSRALDTLIEHPANCKSTGPSQSDGGSSTMSASNPEV
FNFYIYLRTHPLLLRRHFSSSDKAKVALTTEVRRADSISLDERRLFFTTAYAHLHTGCPM
LALEVLSKMPKVHKHSKVSHHGVKDIPHELSVGSRNGPASEPDWSPPGLNGYQSDGNSNS
RSDSVLSFDWSQPSMTIPDEPLELKWDSDKDEEDKDEENNKKTDNSVFQDRQDSMLTIAE
TIKSEDSEDVDDFIAPSEDIFLAHLKFTACLKIMSNELRTLSTGYELDGGKLRYQLCQWL
EREVVAHQHVCSYKPSLPERSVSGDGPVSGLVEEEQPGSPRSDSQKSRRLWLQSNQPLLR
MFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSLSSVVAVNSQPTSIPLLTACTVSVK
TVVANPIVYLTNLTHDILHTINALDSPPHPDVVNNEIYVMHTLAASLSACIYQCLCDGHK
YSHMNHFTGTVYQSVLLSQKQAVKTVSLGEAVQPNTSPAQWPGIASLIRLLSSAGEETQP
GLSVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNCKLWMTVFGGGARVPVTDKAS
SPARTPPPTSPSGLDRKPRRFRVLSSRSGSREESGIDREGPPSPKIVVEPEATSIFKEDF
VPPDLSIWDYFIAKPELPSSQNTVEYDSEESQDSQDEDDEDLESEDVFEPNLPQKEHSNH
NSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVASPLCHAVLKTLQRWEQVLQKRLE
LFGGPPPKYICTQLQDEIPTPGPALLRHKALFEPSNTPFRNNHHSVLPVKRLWQYLVKQE
EVQETFIRNIFTKKPGTNQSVEDHTDSMKYSGVEEAGNSQTESDLGSPGGKARIIHKDSD
IITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDEDEVESKGVGGDDFLVVHA
RDDFGSLHGTTPYTHSSPGTPINVPWLGGHQTGRGAAVMIKRNINNVRRMTSHPTLPYYL
TGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGGLSLWQTNTSG
STLKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPANSLVHAFCCH
DSGATVLSMAQRRQLLLTGGRKGWITILELPHRHQRQSFQAHDSPVKALAVDPTEDCFIS
GSAEGNIKVWSLATQGLLYHFPNEHARQSLFRNLGTGVMQIEVGPASHIFSCGADGTMKM
RTLPNRFAATQSSSTPKNDVRFFI
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaagtccttacaggggccgttaaccccggggacaattgcttctctgtt
gggcgtgtcaacaatgtgcctttcacggcttatgcgtcaggttgtgacgtggtggtttta
ggaagtaattttgagcggctgcagatcatcccgggggccaaacatgggaatatccaggtc
ggttgtgtcaactgctcacaacgaggtggacagattgcagcttcctatggaagcattgtt
tgtgtctttgagccagttcacctcccagatcaaaagtacacatctaaactaagctgccaa
tggcagaagactggtcagtttgttttagagtcaatggtacgaaacctggcttggcatccc
acagatggtactctgttaactggctctggtagccttcagttgtggtccaatgctgatggg
aaagatgaaagtgaagaaaggggaaagcagacaaaacccactggaccagactctaattct
acctggagatgcatctggcagagcaagactgcctctccagtcagttttataaatttctca
cctgatggacagttttttgctactgcaggacaggatgactgcctagtgaaggtttggtac
agcacagacaagtggaagtcatgtgttgcggagctgttcactcctccagacgccagtgtg
agtgtgcagggagagctgaccttttccttcatctacttggcccatcctcgttccgttacg
gggttttcctggaggaagactagcaagtacatgccacgaggggcggtgtgcaatgttctg
ctcacctgctgtaaggacagcgtctgccggttgtgggcagagacgctgttgccaggtgac
agcctcatctccggttaccatagcagccatctttttggcccacatggggaaacggtcaac
tctgctggctcctcttctaagcacacctccaatgggaaatcagcaggaatgtcttcacaa
gaattaagttttcaggaatcttggcattcctcgtcttaccgggatattcctcagccatct
ctgactggctgcctgcctcacgatcagaaccaacaccataaccacaggaggaccagcaac
agcgggacgcctcacgccaacgcgctctgccacttccatatcgcagccagcattaaccca
gccacagacattcctctactgccttccatctctgctctgagtgcggtggaagacgaggaa
cccggcggtctgtttaccatccactggctcaataacaaagagcttcacttcactttagcc
atggaagtctttctgcagcaacttggaggaagtttggaacagaggaacaaatcctctaat
gaagagcttgatgatgaagaaaactctgacgaagaagagaacagagcaagtgacccccaa
tgccctgaaggtggggagcttcctgtagcagcggtggagcatcaggtggacattttgtta
gaggagtggaataaaggggccgacatgctgttcagtattcacccgctggacggctctttg
ttggtctggcatgtcgactggttagatgaataccagccaggcatgttcaggcaatctcag
gtgtcgtttgtgtcccgcatcccagtagcgttccctacaggcgatgcaatctccctcagc
cacagtgtggtcatgtatgcctgcaacaagaatgtggatctggctattcaacatggcaga
cagcggccgcccgggagctccttgtctcaaaccaaatctgctctgataagctacgggagt
cttgggaaagctgctcccagcagcagcctcagactgagtattttcacccctaatgtcctc
atgatctccaaacacgacgatggctcgctgaatcagtgggcagtcagttttgcggaggac
tctgctttctccactgtgctcagcgtctctcacaaatcacgctactgtggtcaccgtttc
cacctcaatgaattggcctgtcactcgctgcttcctctcctcctcaccacctcccaccac
aacgccttgaggacgccagaggcagacggcatcctggctcctgcggagacttactcgact
ggtgtcccagctttctctcatgggtcacgaccctcccgtctgtccctcggaggggtttcc
caagatcccaatgccatctacagcgaactgattctgtggagggtggacccagtcgggccg
ctgtctctgtcaggcggggtctcagagctggccaggatcaattccctccatgcatcagcg
tttgctaatgtagcctggcttcccacactcattcccagcagctgcttaggtgtgtactgt
aactcccccagtgcttgctttgtggcgagtgatggccagtcactcaggctatatcaggct
gttattgaggcgaagaaactcctgagtgaactctccaaccctgagatttctaaatatgtt
ggggaggtgtttaacatcatcagccagcagtccacagcaaaaccaggctgcatcattgag
ctggatgccattacagactttcgggggaaggagacccagctcctgcacgtctttgaggag
gatctgatccttggcagtatgaaaacagaagacacacaagatactccttctacagcaacc
tgcagtaagccagccttctcaggagatttttttctggtggtggtggaactgactcctact
ggtcggtccttgctccacatgtggcatctgcatctggcagcatgtcctgtcataatagag
gaagctacaattcaaaaagaaatcaatgcggtttcttctataagcggctcacagttcatc
ttcgacatccccagctctccggtacagaagagtaaaccctgcacttccaatttacagagt
gcctgtcgtctcagcctgacaacacacatgctgtgcagccaagaaatggctctaccgcaa
ggggtggaagtcattagcgttactccttcagcaggtcatttgagtgcttcatgttctctg
ccatcgggccgtgtgccttatctccttgctacttcctgttctgatggaaaggtgcgcttc
tggaggtgtactgctttgaaaatggaccaatccagtgtacacagcttggtgtatcagtgg
gaagagtggcccctattggtggaggagactcattcgagcagcagcgctgtgagtgtgcct
ggtcggcccatcaaggtcagctgctgtcactctggacggattgctgttgcctacaggcag
acgacggacccaccactgaactcaacacctcatctgaacactcacaacctgctgcagttc
cctcctgccctggtgtcctcccccttctgcagcaacactcacgtgaccccaacccttact
caacagccttgtcaaagtcttgcgttaagcccaaatccagccaatacaaaagaaccagca
gtccatatcagcacctttcagtgtgagtccactggcggttcacagtggattctggagcaa
actatagttctggaaagcacagatccaacaactttttcttccaccaccgacggacgtgcc
aatattccaaataatgcagacttctctacactaaacggaaactgtcctggttctgctaat
aggagccaggttcatttggactgggtttcccaagaggatgggtcacacgtgttgactgtt
ggcattgggacaaagatttatatgtatggccgtctctctgggaagcctccagacttgggc
ctgtcttctcaaacaaatagagaccaaagtctatctcgtctagttctccttcggtctgtt
aatctggtttcctctgttgaaggttcgttacctatcccagtctcactgtcctgggttcga
gatgggatcttggtggtgggtatggactgtgagatgcatgtttattcccagtggcaacca
ccagttccccccaaacccagcattacggtcgtccaagacgcagatattagcagcagcgtc
tcctctatagtgtcggctgtcagacaatgccaagaggacgttttcaccactggtgcaccc
acagcttctttgaccctacccaaacgatccctaacaagatcaatgatgagtctggcgcag
aaacttagtgggaagaaaaccgtttatgaccttcctgtagagatggaagatgctggactc
tttgaagcggctcaccaactctctcctactctgcctcaataccaccctgttcagttactg
gagttgttggatttggggaaggttaaccgtgccaaagcaatcctctctcacttggtaaaa
tgcattgctggggaaattgtggtacttaaagacaatgccacccatccagagaaacgtgtg
cgctctcgaactatcagtgtgggaggcagcacagccagggaccaaaagatattcaacaag
tcagaaagctccagccctgactacaccgagataagctctgtccctcccctgcctctgtac
gctctgctggcagctgatgaggatgcacctcatcttgagaaaggaggcagtatgagcggt
gatagcggacatggctccagtcagactgatgcgtatgatgagctctttcatacacacaac
actctcgatctcaatcctctggacgacgaacaggaggaacctgggaataaggtgatagat
ctttcccagtacagtcctacatacttcgggccagagcatgctcaggttctgtccagccac
ctcctccactccagtctgcctggattaactcgaatggagcagatgtccctcatggcgctg
gctgacaccatcgccacgacaagcacagacctcaaggataaccaggataagagcaaaggt
ggagaaacactggatgagtgcgggttgaagttcttgctggctgtcagactccataccttc
cttctaacatccctgcctcctgtccatcgagcccagctgctgaggcaaggcctttcaacg
tgtcagtatgcctgggccttccactctgaagctgaagaggagctcttgaacatgctgccc
gccctgcagaagggagagcccacctgggccgagctccgagccatgggtgtgggctggtgg
ctgcgcagcaccaacaagctgcgcaggtgtatagagaaggttgctaaggcttcgtttcag
agaaacaacgatcctctggatgctgctatattttacctcgcaatgaaaaagaaggcagtg
gtttggggactgtacaggtctcagaagaatacaaaaatgacagagtttttccacaacaac
ttcagcgaggacaggtggaggaaagctgcattgaagaacgccttctctttgttgggaaag
cagcggttccagcattctgccgccttctttctgctggctggttcccttaaggatgccgtg
gaggtatgtttagagaaaatgcaggacttgcagctagccttggtgatctctagattgtat
gagtctgagtttgagacatcttctacttataaaaagatcctccagagacatgttttggga
caagacaaacagattccagtccatccagatcctttcctgcgaagcatagctttctgggtc
ctggaagattacagcagggcattagacacactgattgagcaccctgcaaactgcaaaagc
actggaccctctcagagcgatggtggttcctcaaccatgtctgcaagtaaccctgaggtt
ttcaacttttacatctacctccgcacacacccgctgctccttcgccgccatttcagctct
tcagacaaagctaaagttgctctgaccacagaagtccgtcgggccgactccatcagcctg
gatgagagaagactcttcttcacaactgcatatgcacacctccacaccggatgccccatg
ttagcacttgaagtcctttccaaaatgcccaaagttcacaagcactccaaagtttcccat
catggagtaaaagacattccacatgaactgagcgtcgggagtaggaatgggccggcatca
gaacccgactggtctccgccaggcctgaacggctaccagtcggatggaaacagcaacagc
aggtccgattcggtgttgagttttgattggagccagccatcgatgacgataccagatgag
cccctggagctgaagtgggacagcgacaaagatgaagaggacaaagatgaagaaaacaac
aaaaaaacagacaacagcgtgtttcaggaccgacaggactccatgttgactatagcagaa
acgataaaaagcgaggatagtgaagacgtcgatgacttcattgctccatctgaagacatc
tttttggcccatcttaagttcacggcttgcttgaagatcatgagcaacgagcttcggact
ctatcgacgggatatgaactggatggagggaagctgcggtaccagctctgtcagtggctg
gagagagaggttgtggctcaccagcatgtttgcagctataaaccttccttaccggaacgg
tccgtctcaggtgatggccctgtttctggcttggtggaggaggaacagcctggcagcccc
cgcagtgacagccagaagagcaggaggctctggctccagagcaatcagccgttactgagg
atgtttctgagctactgcagcttgcacggctcccatggtggaggactggcttctgtacgc
atggaactcatattactgcttcaggagtctcatcaggatgactccctgtcgtctgtggtg
gcagtgaattcccagcctacctctatcccgctgctcacggcctgtacggtcagtgtaaag
acagtggtggccaaccccatcgtctatctgaccaatctgacccacgacatcctgcatacc
atcaatgcactcgactctccgccacatccagatgtcgttaacaacgagatctatgtgatg
cataccttggctgcttccttgtctgcatgtatttatcaatgtctttgtgatggacacaaa
tacagccatatgaaccatttcaccgggactgtgtatcagagtgttttactgtctcagaag
caggcggtgaaaaccgtcagcttgggtgaggctgttcagccaaatacttctcctgctcag
tggcctggtatcgcctctcttattcgcctgttgagctctgcaggtgaggaaacccagccg
ggcctctctgtgctgctctgtgagatcctgacagcagtcttcctgagtctgtttgttcac
ggcatggccacacactccagcaacgagctgtttcgcatcgtggctcacccactcaactgc
aagctttggatgactgtgtttggaggaggcgctcgtgtccctgttacggataaagccagc
agtcctgcaagaactccacctccaacctccccaagtgggttggaccggaaaccacgacga
ttcagggttctgtcatcccgcagtggatccagggaagagtctggaatcgaccgtgaagga
cctcccagtcccaagattgtagtggaaccggaagcgacctccatttttaaagaggatttt
gttcctccagatctcagtatttgggattatttcattgctaagcctgagctgccatcgtca
caaaacacagttgagtatgactcagaggagagtcaggacagccaggatgaagatgatgaa
gaccttgaatctgaagatgtgtttgagcccaacctgccacagaaagagcattcaaaccat
aattcatacagctggtgtttgatgcgcctggccatggtacaactggtgttggtcaacctc
aagtctttttacccgatggcaggatatgatctgttagatttgcctgtggcctcgcctctg
tgtcacgctgtgctgaagacgctgcagcgatgggagcaggtgctgcaaaagcggctcgag
ctgttcggcggccctccgcccaagtacatctgcactcaactccaggatgagatcccaact
cctggccccgccctgctcagacacaaagccctgtttgagccatccaacacccccttcaga
aacaaccaccactcagtgctgccggtgaagcgtttatggcagtacttggtgaaacaggaa
gaagtgcaggagactttcatcaggaacatcttcaccaagaaaccaggcacaaatcagtcg
gttgaggaccacactgacagtatgaaatattcaggagtggaggaggcaggaaacagtcag
actgagtcagatctgggctcccctggaggcaaagcacgcatcatccacaaggactctgac
atcattacagcctttgccatcaacaaggcaaaccgtaattgtttagtcatggcctccaca
catgacattcaggagctggatgtgtcatctatcttggccacgcagatcttgacttggatc
gatgaagatgaagtcgaatccaaaggtgttggtggtgatgactttctggtggtccatgcg
cgtgacgactttggttcgcttcatggcaccactccatacacccacagcagccccggcaca
cccatcaatgtgccgtggcttggaggccaccagaccggcagaggtgcagctgtgatgata
aagagaaatatcaacaacgtgagaagaatgacctctcatcccacacttccatactacctg
acaggggctcaagacggaagtgtgaggatgttcgagtggggtcactctcagcagatcatc
tgcttcagaagtcctggcaactccagagtcaccaggatccgattcaatcaccaagggaac
aagtttggtattgtagatgcagatggaggattaagtctctggcaaaccaacaccagtggg
agcacactcaaaccatacctgacgttgcagtgccacaacaagaccgctcatgactttgtt
tttgttggctcttcttccctcatcgccaccgcaggtctttcaacagacaacaggaatgtt
tgtctctgggacacactcgtcactcctgcaaacagcctagttcatgctttctgctgtcat
gattccggcgccaccgtgctttcgatggcgcagcggcggcagcttctcctcaccggcggg
aggaaaggttggatcaccatcttggagcttccacaccgacaccagcggcagagtttccag
gcccacgactcgccggtcaaagcgctggctgtcgatcccactgaggactgcttcatcagc
ggatccgcggagggaaacattaaggtgtggagtctggccacgcagggcctcctctaccac
ttccccaacgaacacgcccgccagtcgctgttcaggaacctggggacgggggtgatgcag
atcgaggtgggaccagccagccacatcttctcctgcggcgccgacgggaccatgaagatg
aggacgctccccaaccgcttcgccgcgacgcaaagcagcagcacccccaagaacgacgtc
aggttcttcatctag
DBGET
integrated database retrieval system
