Poeciliopsis prolifica (blackstripe livebearer): 129365768
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Entry
129365768 CDS
T09758
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129365768
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129365768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
DUF7742
Motif
Other DBs
NCBI-GeneID:
129365768
NCBI-ProteinID:
XP_054895210
LinkDB
All DBs
Position
Unknown
AA seq
1417 aa
AA seq
DB search
MCDKNASNELFPAVRFKALDYVFEASTTLKISMNLLSLPVPYITGTSDLYPHSGRLPDDT
YRKPWIRGKVISSCKLFVSGSVLDDLGQKNHPVNSLERFIVEKDVEIVPSSNPDSFDEGQ
FIFFLNKQINDSCQETFCKCSPDQTSPQTKSKDLLLSEDFIAPDLVAELKRHLPSLKAKV
SRLKTLPVSDPLQNSMGISISEDAMFSCFRRCETYQKPADAIGDVTCGNFQDQFLKVPLL
QTESLLLPPVVDTSWLKTQNFTTFSGVGGCVNISPEPVDEKFSVLDLLRRTSLSKSPVEI
SQFDLQKKQIKEKRQRGKLIESRCSGNVASPGGTELDFILSPIPKKNRTHIRLPRNYLQE
EKLSPFTPTSLLSTRTKNEMNKTVWSSEKHLTSVLCFLLSEPALDEPASGFHPLREALGA
IKLEKQSFSSAVDKRELYLETGKPEIVLGKNLELIEMMTTEVPTTGQNEKEDFNRMMPEH
EEVEFLLVDFPNNANVVKQKKNPVGSSRISPNSWEQSTTSTSPETRSEPAAGSSALVNVS
SGVAAWFRSSGSSGCSLPSESNIGDNQKKHRPEKNPDPLSDFIMLRSQQPAAAGATTSIS
AVPEEEEVTHQTPEEQHHHHPEEMKTTDRKPAYVSLAAMGDAVREQNPAAVRAGRIDGRP
VGDSDVKHHSRVIQVQPTESQRRAFYELLAVALPCLSSARQLGLHFPSWGDFSSLSPDQT
HFLLKQQDRALSRTPAGSSELVRDQEQLFNLAALVHVLVTFKELLLKCDLSIAVEYLAKA
AETCEDHRLTQLRKRLQIILFLSHRKEEPDFKLLELQQLLAELLQMRKGSNSTEKILVIL
SVESHETSSKVISSLSKVTGAAVSSVCPDEKKLNGASVVSRVSGSDCVLVFEQNIGPDFP
WSCFSVLVEFDHPGPSRWTQICSDQSISRFSFITSLSDSDAEKICWRLEENVPFVLLVTE
GLLNYPLLLQTLESSFSVTVIERSHSLTLQKLGGIHNYTVITVDESTAIVIQQEQDELGQ
DRASERLVMRLSALSLQFSCCWLVLHCPDGRGGGFSSETFDNLVLVYSSLVLFGMKSEEL
DVKVLIVSEVLEMAEFINQICFSSLMSKYGDPVNYLDRDWLTVSPTQEEACLSQFPCVSP
LVGQLMLSRAPSRQWLLGADLPQLSQLLPEVPQKVLKLFSDITSLYLSNAAPATPQINET
NQQPFRTAQTFGAESKFNDLLHPEPQSSFLCGAMNPEDLFPNQNPDSSNFKLDLNGSFGS
PIKDWTGPDPWKEEERLPAWRGRAGAAGRIVERVGDLWAPRDAPDISYLQTSNSPVLLDS
QFSSSHTSYSDLQHPHSAHFIVSQSPPMAAILDQSYHSLTSSGSCSFGSKFWSGQERKRS
GDAAGLVGSVLTPLKRGRLSYEKVPGRKDGQTRLKLF
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgataagaacgcctcgaatgaactcttcccggctgtccgatttaaagctcttgac
tatgtgtttgaggctagcaccactctgaagatctccatgaacttactgtcgctaccagtg
ccgtatataactggtaccagtgatctttacccccacagtggcaggttacctgatgacacc
tacaggaagccatggatccgaggaaaggtgatttcttcctgcaaactctttgtcagtggt
tcagttcttgatgaccttggacagaaaaatcatcctgttaattcattggaaagatttatt
gtggaaaaggatgtggagatagttcccagctctaatcccgactcctttgatgagggtcag
tttattttcttcctaaataagcagattaatgattcatgtcaggaaacgttttgtaaatgc
agtcctgaccagacgagtccacaaactaagagcaaagatctcctcctatctgaggacttc
attgctccagatttggtggcagagttaaaaagacatttaccgtctttgaaagccaaagtg
tccaggctgaagacacttcctgtgtccgacccgctgcagaactcaatgggaatcagtatc
tctgaggacgccatgttcagctgcttcagacgttgtgagacctaccagaaacctgcagac
gccatcggtgatgtcacatgtggaaattttcaggatcagtttcttaaagttcctctcttg
cagacagagtctctgctgttaccgcctgtagtcgacacttcctggcttaaaacgcaaaac
ttcacgactttttctggtgtcggtggttgtgtgaacatttctccagaaccagtagacgag
aaattttctgtgctggatttacttcgtagaacttctctttcaaagtctccagtggaaatt
tcacaatttgatttacaaaaaaaacaaataaaagaaaagagacagagaggaaaactgatc
gaatcaagatgctcagggaatgttgcgtctccaggtggaacagagctggactttattctg
agcccgattcctaagaagaaccgaacccacatccgtctgcccagaaattatctccaagaa
gaaaaactttctcctttcacaccaacatctttgctctcaacaaggaccaaaaatgagatg
aataaaacagtctggagctcagagaagcatctgacctccgtcctttgcttcctgttgtca
gagcctgctttagatgaaccagcctcagggtttcatcctctgcgtgaagcgttgggagct
attaaactagaaaaacaaagtttcagcagtgctgttgacaaacgggaactatatctggag
acgggaaaaccagagatagttctgggtaaaaaccttgagttgattgaaatgatgacgact
gaggttcctacaactggacagaacgagaaggaagacttcaacagaatgatgcctgaacat
gaggaggttgaatttctccttgtggattttccaaacaacgccaatgttgttaaacaaaaa
aaaaaccctgttggatcatcccggatcagcccaaacagttgggaacaaagcaccaccagc
accagtccagagacacgttcagaacccgctgctggttcttctgcgctcgtcaacgtcagc
agtggcgtagcggcctggtttaggagctccggcagttctgggtgctctctaccctccgaa
tcaaacatcggagataatcagaagaaacatcgaccggagaagaacccggaccctctgtcc
gacttcataatgctgaggtcacagcaaccggctgcagctggtgcaactactagcatctct
gcagtaccagaagaagaagaggtgacccatcagacaccagaggagcagcatcaccatcat
ccagaagagatgaagacgactgacaggaagccagcgtacgtgagcctcgctgcgatggga
gacgcagtcagagaacaaaacccggccgctgtgagggcgggtcggatcgatggtcgtcct
gtcggcgactcggacgtcaaacatcacagccgagtcattcaggtccagccaacagagagt
cagcggcgagctttctatgaactgctggccgttgctctgccctgtctgagttcggccagg
cagctggggctccacttcccatcgtggggagacttcagcagcttgtccccagaccagacg
cacttcctgctcaaacagcaggaccgggccctcagcaggaccccagcagggagctccgaa
ctggtcagagatcaggagcagcttttcaacctggctgctctcgtccatgtgttagtgacg
ttcaaagagctgctgctgaagtgtgacctgagcattgctgtagagtacctggccaaagca
gctgagacgtgtgaggatcaccgcctgacgcagctgaggaagaggctgcagatcatcctc
ttcctcagtcacaggaaggaagaacccgacttcaaactgctggagctgcagcagcttctg
gccgaattgctgcaaatgagaaaaggaagcaactctacagagaaaattctcgtcattctc
tctgtggaatctcatgaaaccagttcaaaggtcatcagcagcttgagcaaagtaaccgga
gctgcagtgagttcagtttgtccagatgagaagaaactaaatggtgcctctgtggtcagc
agagtgtccggcagcgactgtgttttggtatttgagcagaacatcggacccgactttccc
tggagctgcttctcagttttggtagagtttgaccatccaggcccgtcccgctggacccag
atctgcagcgaccaaagcatcagccgcttctccttcatcaccagcctgtcagactccgac
gcagagaaaatctgttggcgtctggaggaaaacgtcccgtttgtgttgctggtgaccgag
ggccttctgaattatcctctgctgctgcagacacttgagtcaagcttcagtgtgactgtg
atagagaggagccacagtctcactttgcagaaacttggaggaatccataactacactgtg
atcaccgtagacgaaagtacggctatcgtcattcagcaggagcaggatgaactgggtcaa
gaccgagccagtgagaggctggtgatgaggctgagtgcgctctctctgcagtttagctgc
tgctggctcgtcctgcactgccctgacggccggggcggagggttttcaagcgaaaccttc
gacaacttggtgttggtttattcatctctggttttgttcggcatgaagtccgaggagctg
gatgtgaaggtgctgattgtgtcagaagtgttggaaatggccgagtttatcaatcagatc
tgcttcagctccctgatgtccaaatatggagatcctgtgaactacctggacagggactgg
ctgactgtcagccccactcaggaggaggcgtgtctgtcccagttcccgtgtgtcagtcct
ctggtcggtcagctcatgctgagcagagctccctcccggcagtggctcctgggggccgac
ctgcctcagctctcacagttacttcctgaagtcccacagaaagtcctcaagctcttcagt
gacatcacttccttgtacttgagcaacgcagcgccagcaacccctcagattaatgagaca
aaccaacaacccttcagaaccgctcagaccttcggtgccgagtccaagtttaacgacctt
cttcatccagaacctcagagcagcttcttatgtggagctatgaacccagaggatctgttc
cccaaccagaacccagattcttcaaacttcaaactggacctgaacggttcctttgggagt
ccgattaaggactggaccggtccagatccctggaaggaggaggagaggcttcctgcatgg
agaggcagagctggagcggcagggagaatcgttgaacgtgtcggtgatctgtgggcgcca
agagatgctcctgatatttcgtaccttcagacatcaaacagcccggttctactggactct
cagttcagttccagtcacacttcttacagtgacctccagcatccccacagcgctcacttc
atcgtcagtcagagccctcctatggcggccatcttggatcaaagctatcacagtttgacc
agcagcggttcttgttcttttggatccaagttctggagcggtcaggagaggaagaggagc
ggagacgcagctggtctggttggatcggtgctgacgccgctgaagaggggaaggctgagc
tatgagaaggttcctggcaggaaggacggacagacgaggcttaaactgttttaa
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integrated database retrieval system
