Poeciliopsis prolifica (blackstripe livebearer): 129365859
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Entry
129365859 CDS
T09758
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04142
Lysosome biogenesis
pprl04144
Endocytosis
pprl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129365859 (cltcl1)
04142 Lysosome biogenesis
129365859 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129365859 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129365859 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129365859 (cltcl1)
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
129365859 (cltcl1)
Exosome [BR:
pprl04147
]
Exosomal proteins
Proteins found in most exosomes
129365859 (cltcl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
129365859
NCBI-ProteinID:
XP_054895369
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTTTEEVMFWKWISVNTVA
LVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLVGA
EELFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
DDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQF
STDELVDEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPFY
DSAVVGRYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWAKVL
EEDNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLHRDLVKEAIDSYIKAVDPSAYMEV
VNAASKSNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYEAAKLLFNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVITMMN
HATDAWKEGLFKDIIAKVANVELYYKSLSFYLEYKPLLINDLLTILSPRLDHNRAVSFFS
KMNQLKLVKPYLRSVQNHNNKAVNEALNNLLTEEEDYQSLRASIDAHDNFDTIDLAQRLE
KHELIEFRRIAAYLYKRNNRWRQSVELCKKDKLYKDAMLFAAESKDAELAETLLQWFLEE
ERKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVMVD
KLEEAESQRKTDDDVKEPQPMVFGQQLMLTAAASPVAAQPAYPAYGYPPPAAGAPPAAAG
YPAQPAYGFNM
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatattaccaatacggtttcaggaacatctccagttgcagaacctgggtgtg
aacccagctaacatcggcttcagctacctgaccatggagtcggacaagttcatctgcatc
cgggagaaagtgggcgagcagaaccaggtggtgatcgttgacatgtccgaccccaacaac
ccaatcaggaggccgatctctgctgacagcgccattatgaaccctgcaagcaaggttatt
gcgctaaaagctgccaaaaccctgcagatcttcaacatcgagatgaagagtaagatgaag
gctcacaccaccacggaggaggtcatgttctggaagtggatatctgtgaacaccgtggcc
ttggtgacagacacggcggtctaccactggagcatggagggggattcccaaccgaccaaa
gtgttcgatcggcacgccagtctggcgggttgtcagatcatcaactacagaactgacgag
cagcagaagtggttactgctgattgggatttctgcacagcaaaatcgtgtagtcggagcg
atgcagctgtactcggttgacaggaaagtctcccagcccatcgagggccacgccgctgcc
ttcggggagttcaaagtggagggaaatgccaaaccttccacgttgttctgctttgctgtg
cgctcacaggcgggaggaaagttgcacatcattgaagttggtcagcctgctgcaggaaac
cagccatttgctaagaaagcagtggatgtgtttttccctccggaggcccagacagacttc
cctgtagcgatgcagattgggaacaagcatggtgtgatatatttgatcacaaaatatggc
tacattcacctatacgacctggagtctggagtgtgtatatacatgaaccgaatcagtgca
gagactatctttgttacggcccctcatgaggccacctcagggatcattggcgttaataag
aagggacaggtcttgtcagtgtgtgttgaagaagaaaacattgtcaactatgccacaaac
gttctgcagaaccctgatctggccctgaggatggccgtgaggtctaatcttgttggggct
gaggagctttttgccagaaagtttaatactctgtttgcccagggaagttactcagaggct
gcaaaggttgctgcatctgcacccaagggtatcctccgaacagcagaaaccatacgtaag
ttccagagtgtcccagcccagcctggtcaagcctcacccctgctccagtacttcgggatt
cttttggaccagggccagctcaacaagtttgagtctttagagctgtgcaggcccgtcctg
cagcagggccgcaaacagctcctggagaaatggctgaaggaggacaagctggagtgttca
gaggaactgggcgatctggtaaaggcctcagacccaacgttagctcttagtgtttatctc
agagcaaatgtccccaacaaagttattcagtgctttgcagaaacgggacagttccagaag
attgtgctgtatgccaaaaaggtgggatacacaccagactgggtgtttttgttaaggaac
gtaatgcgagtcaacccagaccaaggactgcagtttgcccaaatgcttgtccaagatgag
gagccgctggccaacatcaaccagattgttgatgttttcatggagggcagcctgattcag
cagtgcacctccttcctgttggatgctctgaagaacaaccgtccagctgaaggacactta
cagacacgcctgcttgagatgaacctgatacacgctccccaggtagcagatgcgatcctg
gggaaccagatgttcacacactatgaccgggcccacgtcgctcagctgtgtgagaaggca
gggctgctgcagagagcactcgaacactacaccgacctgtacgatatcaaacgagccgtg
gtgcacacacatctgctcaaccctgagtggctggtgaactttttcggctccttgtcagtc
gacgactctttggagtgtttgagggccatgttgtcggctaacatcaggcagaacctgcag
ctgtgtgtgcaggtagcatcaaagtatcatgagcagctgggaactcaggcgctagtggag
ctcttcgagtccttcaagagttatgaaggtctgttttacttccttggctcgatcgtgaat
ttcagccaggaacccgacgttcactttaaatacatccaggctgcttgtaagacgggtcag
atcaaagaagtggagaggatatgtagagagagcaactgctacgacccagagagggttaaa
aacttcctaaaggaggcgaagttaacagaccagcttcccctcatcattgtgtgcgatcgc
tttgactttgtccatgatctagtgctctacctgtaccgcaacaatctgcagaaatacatc
gaaatctatgttcagaaagtgaatcccagccggttgcctgtggtgatcggtggtttgttg
gatgtagactgttcagaggatgtcatcaagaacctgatcatggtggtcagaggacagttt
tccaccgatgagctggtggacgaggtggaaaagaggaacaggttgaagcttctgctgcca
tggctggagtcacgtattcacgagggatgtgaggaaccagctacccacaatgcactggcc
aagatctacattgacagcaacaacacaccggagcgcttcctgaaggagaacccgttctac
gacagcgccgtggtcggccgctactgcgagaagagagacccccacctggcctgcgtggcg
tatgagagggggcagtgcgacctggacctcatcaaagtttgcaatgaaaattcattattt
aagagtgaagctcggtatcttgtacgacggaaagatccggagctctgggccaaagtgttg
gaggaagacaacccgttcagaagacaactcatcgatcaggtggtgcagacagctctgtcg
gagacccaggacccagaggaggtgtcggtcacagtcaaggccttcatgactgcagaccta
ccaaacgagctgattgagttgctggagaagattgttcttgataactctgtcttcagtgaa
cacagaaacctccagaatctgctgattttaacggctatcaaggccgaccgcactcgtgtg
atggagtacatcaacaggctagataactatgacgctcccgacatcgctaacattgctatt
agcaatgagctctttgaagaggcgtttgccattttcaagaagtttgatgtcaacacctca
gctattcaggttttgattgagcacatagggaatttggaccgagcctatgagtttgcggag
cgctgcaacgagcctgcagtgtggagtcagttagccagagctcagctgcacagggacctg
gtcaaggaggccattgactcctacatcaaagccgtggatccatcagcatacatggaggtg
gtcaatgcagccagcaagagcaataactgggaggatttggtgaagtttctgcagatggct
cgtaagaaggccagagagtcgtatgtagagacggagttgatttttgctctggctaaaacg
aaccgtctggctgagctggaagaatttgtcagtgggcccaataatgctcacattcagcag
gtgggagacagatgttacgaggagggaatgtatgaagcggccaaacttttgttcaacaac
gtgtccaactttgcccgacttgcgtctacattagtccacctcggggagtaccaggcggcc
gtggacagcgccaggaaagcaaacagcacccggacgtggaaggaggtttgctttgcgtgc
gtcgacggcgaggagttccggttggctcagatctgcggccttcacatcgtgatccacgcc
gacgagctggaggacctgatcagctactatcaggaccgcgggtactttgaggagctcatc
gctctgctggaggcagcgctgggcctggagcgcgcccacatggggatgttcacggagctc
gccatcctctactccaagttcaaacctcagaaaatgagggaacatctggagctcttctgg
tcaagagtcaacatcccaaaggttcttcgtgcagctgagcaatctcatttatgggcagag
ctggttttcctttatgataaatacgaggagtatgacaacgctgtcatcactatgatgaac
catgcaacagatgcatggaaagaaggcctgttcaaagacataatcgccaaggtcgccaac
gtggagttatactacaaatctctttctttctacctggaatacaaacctctgctcattaat
gacctgctgactattttgtctccccggttggatcataacagagccgtcagctttttctct
aagatgaatcagctgaagttggtcaagccctacttgagatcggtccagaatcacaacaac
aaggccgtcaatgaagcgctcaacaacttgctaacggaggaggaagactaccagagcctg
agagcttccatcgatgctcacgataactttgacaccatcgacttggctcagaggttagag
aaacacgaactgatcgagttcagacgcatcgctgcttatctgtacaaaagaaacaaccgc
tggaggcagagtgtggagctttgcaagaaggacaagctatacaaggatgccatgctcttc
gctgcagagtcaaaggatgccgagctggcagagactctgctgcagtggttcctggaggaa
gagaggaaggagtgctttgccgcctgcctgttcgcctcctacgacctcctccaccctgat
gtggtgctggaactggcctggaggcacaacataatggactttgccatgccctacttcatt
caagtcatgagagagtacctcactaaggttgatgaatttgcagcaaaggtgatggtggac
aaactagaggaggcagaaagccagaggaaaacagatgatgacgtgaaggagcctcagcca
atggtgtttggccagcagttgatgctgactgcagctgcctctcctgtggcggctcagcca
gcgtacccggcttacggctaccctcctcccgccgccggcgctcctcccgctgccgctggt
taccccgcccaaccagcctacggcttcaacatgtaa
DBGET
integrated database retrieval system
