Poeciliopsis prolifica (blackstripe livebearer): 129365863
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Entry
129365863 CDS
T09758
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129365863 (lrrc4ca)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Podoplanin
DUF7617
Ig_6
Sp38
Reovirus_L2_4th
DUF6821
Syndecan
RIFIN
Motif
Other DBs
NCBI-GeneID:
129365863
NCBI-ProteinID:
XP_054895384
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MFNKMTSSQQQQMMRGPRWNRAFSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTQYKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSPENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGP
TSSASIWESPSPTSTTTTTVRTPLSTRATEKPYTTPVTESSLNGLDEVMKTTKIIIGCFV
AITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPSLEHE
HLNHYNTYKTAYNHASAMNSIHSSAHEPLLIRATSKDNVQETQI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatgacctcttcccagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttttccgaccctttatttgtgctgcttctagccctccagctgctggtagtggca
ggactggtgcgtgctcaaacgtgtccttctgtttgctcctgcagtaaccagtttagcaag
gttatttgcacacgcagaagcttgcgagaagttcctgatggcatctctaccaacacacgc
tatttgaatctgcaagaaaatctcatacaggtgataaaggtggacagcttcaaacatcta
agacacttggagattctgcagctgagcaaaaaccacatacgtaaaattgagctgggggct
ttcaatggacttgcaagcctcaataccttggagctttttgataatagactcaccaccatc
ccaaacggagcatttgagtatttgtctaagctgaaggagctttggctaagaaataatcca
atagaaagcattccttcttatgctttcaacagagttccctcattacgaaggttagaccta
ggggagctcaaaaggctctcatacatttcagaaggagcctttgaaggattgagcaatttg
cgctatctaaatttgggaatgtgcaatttgaaggaaattcccaatctcactccattggtc
aaactggatgaacttgaaatgtctggaaaccagttgtctgttatccggcctggttcgttt
aaagggcttatccacctgcaaaagctatggatgatgcatgctcaaatccagactatcgaa
aggaactcatttgatgatcttcagtcacttgtggagcttaaccttgcccataataaccta
acgcttttgccccatgatctctttactcctttacatcatttggagagggtgcacttgcac
cacaacccctggaattgcaactgtgacatcctgtggctaagctggtggcttaaggagatg
gttcctgcaaacaccagctgctgtgcccgctgcagctcacctacccaatataagggccgc
tatattggtgagcttgaccagaattactttcattgttatgctcccgttattgtggagcct
cctgcagacttaaatgtaacagagggaagtgctgctgagctgaaatgtagagccagctcg
ctgacctcagttagctggattacacccaatggttcaataatgacacatggtgcatacaaa
gtcagaatttctgtgctaaatgatggcacactgaatttcacaaatgttaccatgcaggac
acagggacatacacgtgtatggttagtaattctgcaggtaacacaacagcctcagccaca
ctgaatgtgtcctctccagagaacagcagcttcagctacttcaccacagtgacagtagag
acaatagaaacacctcataacgaaggcttcaccaccactgttcaacagaaagtgggccct
acatcctctgccagtatatgggaaagtccttcacccacctctacgacaacgacaacagtt
cgaaccccactgtccacacgtgcaacagaaaagccctacacaacacctgtaacagagagc
tcgctcaacggtttggatgaggtcatgaagacgactaaaatcatcattggctgctttgtt
gcaatcactcttatggcagcagtaatgctgattatcttctacaagatgcggaagcagcat
catcagcagaatcaccatgcacccacacgcactattgagatcatcaatgtagacgaggac
tgcgtaacaggaggcccaggcatggagggccatcttactctgccgtctctggagcatgag
cacctcaaccactacaatacctacaagactgcctacaaccatgcctcagctatgaattcc
atacacagctcagctcacgaacctttgttaatccgggccacctcaaaagacaatgtacaa
gagacccaaatctaa
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