Poeciliopsis prolifica (blackstripe livebearer): 129366004
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Entry
129366004 CDS
T09758
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129366004 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprl03009
]
129366004 (ufd1l)
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129366004 (ufd1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
129366004
NCBI-ProteinID:
XP_054895571
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MVSNFSFHHVFDHPMARGFPNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQL
SRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVN
LMVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKP
DKAVSIIECDMNVDFDAPLGYKEPERRTQNHDEPTEEEGDASSYADMDTGFRAFTGSGNR
LDGKTKGIEPSPAPLTASDIKRGIPNYDFKVGRITFIRNSRPQPRRNVEDDDAMNRFIAF
SGQGQSLRKKGRKP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcaatttttccttccatcatgtgttcgaccacccaatggcccggggctttccg
aaccgcttctccactcagtaccgctgctattcggtgtccatgctggctggacccaacgac
cgctccgatgtggagaaaggaggcaaaataattatgccaccttctgcacttgatcagctc
agcaggcttaacatcacctatccaatgctgttcaaactcaccaacaagaactcagacagg
atgacccactgtggagttctggagtttgtagcagatgaaggaatctgttaccttccacac
tggatgatgcagaatcttctcctggaagaagggggtctagttcaagtggaaagtgtcaac
cttatggtggccacatattcaaagtttcagccacagagccctgacttcctagatataaca
aacccaaaagcagttctggagaacgctctgagaaactttgcgtgcttgaccactggtgat
gtcatagccataaactacaatgaaaagatctacgagctgcgggttatggaaaccaaacct
gacaaagctgtatccatcatcgaatgtgacatgaatgtggattttgatgctcctttgggt
tacaaagagcctgagcgacggactcagaaccacgatgaaccgacagaggaagaaggagac
gccagtagttatgctgacatggacacaggattcagagctttcactggctctggaaatcgc
ctagatgggaaaacaaagggaattgaacccagtcctgctcctctaactgcgagtgacatc
aaaagaggcattccaaactatgactttaaagtcggccggatcaccttcatcagaaactcc
agacctcagcccaggagaaatgtagaagacgatgacgccatgaacagatttattgccttt
tctggacaaggacagtcattgcggaagaagggcagaaagccttga
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