Poeciliopsis prolifica (blackstripe livebearer): 129366146
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Entry
129366146 CDS
T09758
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03030
DNA replication
pprl03410
Base excision repair
pprl03420
Nucleotide excision repair
pprl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129366146 (rfc5)
03410 Base excision repair
129366146 (rfc5)
03420 Nucleotide excision repair
129366146 (rfc5)
03430 Mismatch repair
129366146 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprl03032
]
129366146 (rfc5)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129366146 (rfc5)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129366146 (rfc5)
DNA replication proteins [BR:
pprl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129366146 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
129366146 (rfc5)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129366146 (rfc5)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129366146 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
129366146 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_lid_RFC1
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
AAA_24
ResIII
AAA_16
DUF815
PhoH
AAA_7
nSTAND_NTPase5
AAA_19
AAA_5
TIP49
AAA_30
ATPase_2
DNAX_ATPase_lid
nSTAND3
AAA_2
Thioredoxin_6
Gp44_lid
DUF4119
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
129366146
NCBI-ProteinID:
XP_054895798
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MATTSKGQLQTRNLPWVEKYRPKTLDDLISHKDILSTIQRFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQKENIDVSPDGMKAIVNLSTGDMRRSLNILQSTSMAYEKVTEHTVYTCTGHPLRSD
IANILDWCLNKDFTSAYKQVLELKTLKGLALHDILSEVHLLVHRVDFPPAIRMGLLIKLA
DIEYRLAAGTNEKIQLSSMVAAFQAVRDMVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacaagcaaagggcagttacagaccagaaacctgccatgggttgaaaaatac
agacctaagacactggatgatttaatttcacacaaagacattctgagcaccatccagagg
ttcatcagcgaagacaagcttccccacctgttgttctacggccctcctggaacaggaaag
acctccaccatcctcgcctgcgcaaggcagctctacaaggacaaagagtttaactccatg
gtgttggagctaaatgcatcagacgacagagggattgacgtagtccgaggtcctattctg
agcttcgccagcaccaggactattttcaagaagggcttcaagttggtgatactggatgag
gccgatgccatgacccaggatgcccagaatgcattgcgacgagtcattgagaagttcaca
gaaaacactcgattctgcctgatctgcaactacctgtccaagatcatcccagccctgcag
tctcgctgcaccaggttccgctttggaccgctgtctccggaccagatgatccctcgactg
gagcacgttatccagaaggaaaacattgacgtctctccagatggaatgaaggccatagtc
aatctgtcgacaggtgatatgagaagatcactcaacatcctgcagagcaccagcatggcg
tatgagaaggtcacagagcatacggtctacacctgcaccggccatcctctccgctccgac
atagccaacatcctagactggtgcctcaacaaagacttcacttcagcttataaacaggtt
cttgagctgaagactttgaagggtttggctctgcatgatattctgagtgaagtgcatctg
ctcgtccacagagtggactttcctccggccatacggatgggtctgcttatcaaattagcc
gacatagaataccggctggcggcaggaactaatgaaaaaatccagctgagctccatggtt
gcagctttccaggccgttagagacatggtggtcagcgaagcctcttag
DBGET
integrated database retrieval system
